Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5068 |
Symbol | |
ID | 7974187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5380809 |
End bp | 5382938 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795662 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_002946936 |
Protein GI | 239818026 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCTT CCGCGAAGTC CGTGCCGCCC GAAAAGACCA CAAGCCCGCC CGCTGCCGCC CCGGCCGCGC CCGGGGCCGG GCTGAGCGCC GTGCAGCGCG CGCTGCGCAA GCTCGGCCTG GTGCGCGACA TCGACTTCGC GCTCTACCTG CCGATGCGCT ACGAGGACGA GACGCGCATC GTGCGCCTGG CCGACACGCG CGACGGCGAC ATGGCGCAGG TCGAGGGCGT GGTGACCGAA TGCGAGGTAG TGTTCCGCCC GCGCCGCCAG CTGATCGCCA CCATCGACGA CGGCAGCGAC ACCTGCCAGC TGCGCTTCTT CAACTTCTAT CCCTCGCAGC AGAAGCAGCT GGCCGTCGGC GCGCGCGTGC GCGTGCGGGG CGAGATGCGC GGCGGCTTCG TCGGGCGGCA GATGATGCAT CCCACCGTCA AGGCGGCCGG CACGGCATTG CCGCAGGCAC TGACGCCGGT CTACTCGACC ATTGCCGGCC TGCCGCAGCC GGTGCTCCGG CGCGAGGTGC GCTCGGGCCT GGCGCGCGCG GTGCTCGACG AGACGATCCC CGTGCAGATC GGATGGCGCG GCGCCTGGGA CCTGCGCAGT TCGCTGACCT TCCTGCACTA CCCGACGCCC GACGTGGCCA TGGCCACGCT CGAAGACCAC AGCCATCCGG CATGGCAGCG CATCAAGGCG GAAGAGCTGC TCGCGCAGCA GCTCTCGCAA TTGCAGGCGC GGCTGGAGCG CGCGGCGCAG CGGGCGCCGA TGCTGCCTTC CTCGGCCGAG CCGCAGGCGA GCTCGCTGCA TGCGCAGCTG CTCGCGGTGC TGCCCTTCGG CCTGACCGGC GCGCAGCAGC GCGTGGGCGA GGAAATCACG CGCGACCTCG GCCGCGAGAT CCCGATGCAC CGCCTGCTGC AGGGCGACGT GGGCTCGGGC AAGACCGTGG TGGCGGCGCT CGCGGCGGCG CGCTGCATCG ATGCGGGCTT CCAGTGCGCG CTGATGGCGC CGACCGAGAT CCTCGCGGCT CAGCACTTCG GCAAGCTGGT CGGCTGGCTC GATCCGCTCC TGGCCGAGCG CGGCCTGCGC GTGGCCTGGC TCACCGGCAG CCAGAAGAAG AAGGAGCGCG ACGCGATGTC GGCCGCGGTC GAGAGCGGCG AGGCGGCGCT GGTCATCGGC ACCCATGCCG TGATCTCGGA GAAGGTGCGC TTCAAGAACC TCGCATTGGC GATCATCGAC GAGCAGCACC GCTTCGGCGT GGCGCAGCGG CTGGCCCTGC GCGGCAAGGC CGTGGGCCAC CTCGAGCCGC ACCTGCTGAT GATGAGCGCC ACCCCGATCC CGCGCACGCT GGCGATGAGC TACTACGCCG ACCTGGACGT TTCCACGCTG GACGAGCTGC CGCCGGGCCG CACGCCCATC GTCACCAAGC TGGTGGCCGA CCACCGGCGC GACGAGGTAA TCGACCGCAT CCAGGCGCAG ATCGCGCAGG GCCGGCAGGT CTACTGGGTC TGCCCGCTGA TCGAGGAGAG CGAAGCGGTC GACCTGCGCA ACGCCACCGA GACGCGCGAC GAGCTCGCCG ATGCGCTTGG CGCGGCCGTC AACGTCGGGC TGCTGCATTC GCGCATGCCC ACGGCCGAGA AGCAGGCGGT GATGGCCGCC TTCACGGCCA ACGAGATCCA GGTGCTGGTG AGCACCACCG TGATCGAGGT GGGCGTGGAC GTGCCGAACG CCTCGCTGAT GGTGATCGAG CATGCCGAGC GCTTCGGGCT CTCGCAGCTG CACCAGCTGC GCGGCCGCGT GGGCCGCGGC GCCGCGGCCT CGGCCTGCGT GCTGCTCTAC GCGCCGGGCG ACAGCGGCCG TGTCGGCGAA GCGGCCCGCG CCCGGCTCAA GGCCATGGCC GAAACCAGCG ATGGTTTCGA GATCGCGCGG CGCGACCTCG AGATCCGCGG CCCCGGCGAA TTCCTGGGAG CGCGCCAGTC GGGCGCGCCG CTGCTGCGCT TTGCCGACCT CAGCACCGAC ACGATGCTGC TCGACTGGGC GCGCGAGCTC GCGCCGCTGA TGCTCGACAA GCACCCCGAG CTGGCCCAGC GCCACATCGA CCGCTGGCTC GGCACCAAGG CCGAGTACCT GAAGGCCTGA
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Protein sequence | MPASAKSVPP EKTTSPPAAA PAAPGAGLSA VQRALRKLGL VRDIDFALYL PMRYEDETRI VRLADTRDGD MAQVEGVVTE CEVVFRPRRQ LIATIDDGSD TCQLRFFNFY PSQQKQLAVG ARVRVRGEMR GGFVGRQMMH PTVKAAGTAL PQALTPVYST IAGLPQPVLR REVRSGLARA VLDETIPVQI GWRGAWDLRS SLTFLHYPTP DVAMATLEDH SHPAWQRIKA EELLAQQLSQ LQARLERAAQ RAPMLPSSAE PQASSLHAQL LAVLPFGLTG AQQRVGEEIT RDLGREIPMH RLLQGDVGSG KTVVAALAAA RCIDAGFQCA LMAPTEILAA QHFGKLVGWL DPLLAERGLR VAWLTGSQKK KERDAMSAAV ESGEAALVIG THAVISEKVR FKNLALAIID EQHRFGVAQR LALRGKAVGH LEPHLLMMSA TPIPRTLAMS YYADLDVSTL DELPPGRTPI VTKLVADHRR DEVIDRIQAQ IAQGRQVYWV CPLIEESEAV DLRNATETRD ELADALGAAV NVGLLHSRMP TAEKQAVMAA FTANEIQVLV STTVIEVGVD VPNASLMVIE HAERFGLSQL HQLRGRVGRG AAASACVLLY APGDSGRVGE AARARLKAMA ETSDGFEIAR RDLEIRGPGE FLGARQSGAP LLRFADLSTD TMLLDWAREL APLMLDKHPE LAQRHIDRWL GTKAEYLKA
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