| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5060 |
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| Symbol | rplN |
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| ID | 7974179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5374367 |
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| End bp | 5374735 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795654 |
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| Product | 50S ribosomal protein L14 |
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| Protein accession | YP_002946928 |
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| Protein GI | 239818018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0093] Ribosomal protein L14 |
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| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0815516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCAAA CTGAATCCCG GCTCGAAGTG GCCGACAACA CAGGCGCGAA GTCCGTCCTG
TGTATCAAGG TGCTCGGTGG CTCCAAGCGG CGTTATGCCA GCGTGGGCGA CGTCATCAAG
GTGAGCATCA AGGAAGCCGC TCCGCGTGGT CGCGTCAAAA AGGGCGAGAT CTACAGCGCA
GTGGTGGTCC GCACCGCCAA GGGCATCCGT CGCGCCGACG GTTCGCTCGT CAAATTCGAT
GGCAACGCAG CCGTGTTGCT CAACGCCAAG CTGGAGCCGA TCGGCACCCG CATCTTCGGA
CCGGTGACGC GCGAGCTGCG CACCGAAAAG TTCATGAAGA TCGTGTCGCT GGCCCCCGAA
GTTCTCTAA
|
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| Protein sequence | MIQTESRLEV ADNTGAKSVL CIKVLGGSKR RYASVGDVIK VSIKEAAPRG RVKKGEIYSA
VVVRTAKGIR RADGSLVKFD GNAAVLLNAK LEPIGTRIFG PVTRELRTEK FMKIVSLAPE
VL
|
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