| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5048 |
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| Symbol | |
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| ID | 7974167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5368684 |
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| End bp | 5369049 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644795642 |
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| Product | ribosomal protein S13 |
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| Protein accession | YP_002946916 |
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| Protein GI | 239818006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TTGCTGGCAT CAACATTCCG CCGCACAAGC ACGCTGAAAT CGGCCTGACC
GCCATCTTCG GCATCGGTCG CACCCGCGCC CGTCAGATCT GCGAAGCGAG CGGCATCGAA
TATTCGAAGA AGATCAAGGA CCTGACTGAC GCCGATCTCG AAAAGATCCG CGACCAGATC
GCCTTGTTCA CCATCGAAGG CGATCTGCGT CGCGAGACGA CGATGAACAT CAAGCGTTTG
ATGGACATCG GCTGCTATCG CGGCTTCCGT CACCGTCGCG GCCTGCCGAT GCGCGGCCAG
CGCACGCGCA CCAATGCCCG CACCCGCAAG GGTCCGCGCA AGGCTGCGCA GTCCCTGAAG
AAATAA
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| Protein sequence | MARIAGINIP PHKHAEIGLT AIFGIGRTRA RQICEASGIE YSKKIKDLTD ADLEKIRDQI
ALFTIEGDLR RETTMNIKRL MDIGCYRGFR HRRGLPMRGQ RTRTNARTRK GPRKAAQSLK
K
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