| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5035 |
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| Symbol | |
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| ID | 7974153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5355869 |
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| End bp | 5356888 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795628 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946903 |
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| Protein GI | 239817993 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.401942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTT CTTCAAATTT CAAAACGAAC CGCCGCGCCG CACTGGCCGT TTCCGCCGCC
GCCATCGCCC TCGCGGCCAC TCCTTCCTGG GCCCAGAGCA CCTGGCCGAC CAAGCCGGTG
CGCATCGTCG TGCCCTTTGC GGCCGGCGGC ACCACCGACA TCCTGGCGCG CGCCGTTGCG
CCCGAACTGT CGAAGGCCTT CGGCCAGCAG TTCATCGTCG ACAACCGCGC GGGCGCGGGC
GGCAACGTGG GCGCCGAGAT CGTGGCGCGC GCGCCGAACG ACGGCTATAC GCTGCTGATG
GGCACGGTCG GCACGCACGG CATCAACCGC GCGCTCTATC CCAAGCTGCC GTTCGACCCG
ATCAAGGATT TCGTGCCGAT CACGCTGGTG GCGGCCGTGC CGAACGTGAT GGAAATGAAC
GCCGACAAGG CCAAGGCGCT GAACATCCAC AACGTGCAGG ACTTCATCAA GTACGCCAAG
GCCAACCCCG GCAAGCTCAA CATGGCCTCG AGCGGCAGCG GCACCTCGAT CCACCTGGCG
GGCGAGCTCT TCAAGAGCAT GACCGGCACC TTCATGGCCC ACATCCCGTA CAAGGGCTCG
GGCCCGGCGC TGCTGGACAT GGTGGGCGGC AATGCCGACG TGATGTTCGA CAACCTGCCC
TCATCGATGG CGCAGATCAA GGGCGGCAAG CTCACGGCCC TGGCCGTGAC CAGCGCCAAG
CGTTCGCCGG CGCTGCCCGA CATCCCGACG GTCGAGGAAG CGGGCGGTCC GTCGCTCAAG
GGCTTCGAGG CGAGCTCGTG GTTCGGCCTG CTGGCGCCGG CCGGCACCTC GCCCGAGATC
GTGAACCGGA TCCAGCAGGA AGTGGCCAAG TCGCTCGGCA CCCCCGCCAT CAAGGAAAAG
ATGCTCGCCC AGGGCGCCAT CCCGAGCGGC AATTCGCCAG CCGACTTCGC CAAGCTGATT
GCCAGCGAGC ACGTGAAGTG GGCGAAGGTG GTGAAGGACT CAGGCGCGAA AGTGGACTAA
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| Protein sequence | MTSSSNFKTN RRAALAVSAA AIALAATPSW AQSTWPTKPV RIVVPFAAGG TTDILARAVA
PELSKAFGQQ FIVDNRAGAG GNVGAEIVAR APNDGYTLLM GTVGTHGINR ALYPKLPFDP
IKDFVPITLV AAVPNVMEMN ADKAKALNIH NVQDFIKYAK ANPGKLNMAS SGSGTSIHLA
GELFKSMTGT FMAHIPYKGS GPALLDMVGG NADVMFDNLP SSMAQIKGGK LTALAVTSAK
RSPALPDIPT VEEAGGPSLK GFEASSWFGL LAPAGTSPEI VNRIQQEVAK SLGTPAIKEK
MLAQGAIPSG NSPADFAKLI ASEHVKWAKV VKDSGAKVD
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