| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5015 |
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| Symbol | |
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| ID | 7974133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5329056 |
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| End bp | 5330030 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795608 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946883 |
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| Protein GI | 239817973 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.525082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC TGCTTGCACT CATGGCATTC GCCGCTGCTG CCGCCGGCGC CCATGCCCAG
GATTTCCCCG CAGGCAAGAC CGTCACGCTG GTGGTGCCTT TCTCCGCCGG CGGCCCGACC
GACCGCGTGG CCCGCGACCT GGCCGAAGCC CTGCAAAAGA CCCTGGGCAC GACGATCGTG
GTGGACAACA CCGCGGGCGC CGGCAGCTCC ATCGGTACCG CCAAGGTGGC CCGCGCGGCG
CCGGACGGCT ACACGCTGCT GCTCAACCAC ATCGGCATGT CGACGATGCC TGCGCTCTAC
CGCAAGCTGC CGTTCAACGT GGAGAACGAC TTCGAATACC TCGGCATGGT CAATGAAGTG
CCGATGACGC TCATCGGCAA GCCGACGCTG CCGGCCAACA ACTACAAGGA GCTGACGGCC
TGGATCGCGG CCAACAAGGG CAAGATCAAC CTCGGCAATG CCGGCCTGGG CGCCGCCTCG
CACCTGTGCG GCCTCTTGTT CCAGAGCGCG CTCAAGGTCG AGATGACGCC GGTTCCCTAC
AAGGGCACCG CGCCGGCCAT CGCCGACCTG CTGGGCGGCC AGATCGACCT CCTGTGCGAC
CAGACCACCA ACACCACCTC GCAGATCGAG GCCAAGAAGG TCAAGGCCTA CGCCGTGACC
ACCAGCAAGC GCCTGACCAC GCCGGCCCTG AAGGACCTGC CGACGCTCGC CGAATCGGGC
CTGAAGGACT TCGAGGTCTC GATCTGGCAC GGCGTGTACG CGCCCAAGGG CACGCCGGCA
CCGGTGCTGA AGAAGCTCAA CGAAGCCATC AAGGCCGCCA TGAAGGACCC GGGCTTCATC
AAGCGCGAGG AAGCGCTGGG CGCCGTGATC ACCACCGACA AGCGCACCGA GCCGGCCGAG
CACAAGAAGT TCGTCTCGGC CGAGATCGCC AAGTGGGGCC CGATCATCAA GGCCGCCGGC
GTGTACGCCG ACTGA
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| Protein sequence | MKKLLALMAF AAAAAGAHAQ DFPAGKTVTL VVPFSAGGPT DRVARDLAEA LQKTLGTTIV
VDNTAGAGSS IGTAKVARAA PDGYTLLLNH IGMSTMPALY RKLPFNVEND FEYLGMVNEV
PMTLIGKPTL PANNYKELTA WIAANKGKIN LGNAGLGAAS HLCGLLFQSA LKVEMTPVPY
KGTAPAIADL LGGQIDLLCD QTTNTTSQIE AKKVKAYAVT TSKRLTTPAL KDLPTLAESG
LKDFEVSIWH GVYAPKGTPA PVLKKLNEAI KAAMKDPGFI KREEALGAVI TTDKRTEPAE
HKKFVSAEIA KWGPIIKAAG VYAD
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