| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5005 |
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| Symbol | |
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| ID | 7974123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5317579 |
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| End bp | 5318364 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795599 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002946874 |
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| Protein GI | 239817964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.62031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCACG GCAATCCCAA TCAACGCAAC GTGCTGGGCG GTTCCATCAA GGACCGAGTT
CGTCCCCCTA GCAGTGCCGA ACTCGGCGGC ATCCCGTGGC TGCCCACGCT CACGCCGGCC
GAGCGCCGCC GCGCCGAAGC CGCGCTGGTG GTGGGCGAGG CCGAGGTCGG CGACCTGGTC
TGCCGCGTCG GCCGCTCGCC CACCTACTGG TTCGGCGTGG TCGAGGGCCT GCTCAAGATG
AGCAACGACA ACGCCGACGG CGGCTCCGTC ACCTACACCG GCGTGCCGCC CGGCGGCTGG
TTCGGCGAAG GCACGGTGAT GAAGCGCGAG CCCTACCGCT ACAACATCCA GGCGCTGCGG
CGCAGCGTGG TGGCGGGGCT GCCGATCGAG AGCTTCCACT GGCTGCTCGA TCATTCGATC
GGCTTCAACC GCTTCGTGAT GAACCAGCTC AACGAGCGGC TCGGCCAGTT CATTGCGGCG
CTGGAGATCG ACCGGCTCAA CAACCCCGAC GCGCGCGTGG CGCGCAACCT CGTGTCGCTG
TTCAACCCGG TGCTCTACCC GGGCGTGGGC GAAGTGCTGC GCATCACGCA GCAGGAGCTG
GCCTACCTGG TCGGCCTGTC GCGCCAGCGC GTGAACGAGG CGCTCAACGG CCTGTCGGCA
GAGGGGTTGA TCCGGGTGGA GTACGGTGGG CTGCGCGTGC TCGACCTGCC GGGCCTGCGC
GCGAGCGCGA TGTCGAACAA GAAGAACAGC AGCAACAGCC GCTCACCCGA AACGGAAAAC
CCATGA
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| Protein sequence | MPHGNPNQRN VLGGSIKDRV RPPSSAELGG IPWLPTLTPA ERRRAEAALV VGEAEVGDLV
CRVGRSPTYW FGVVEGLLKM SNDNADGGSV TYTGVPPGGW FGEGTVMKRE PYRYNIQALR
RSVVAGLPIE SFHWLLDHSI GFNRFVMNQL NERLGQFIAA LEIDRLNNPD ARVARNLVSL
FNPVLYPGVG EVLRITQQEL AYLVGLSRQR VNEALNGLSA EGLIRVEYGG LRVLDLPGLR
ASAMSNKKNS SNSRSPETEN P
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