Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4982 |
Symbol | |
ID | 7974264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5294220 |
End bp | 5295623 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644795577 |
Product | histidine kinase |
Protein accession | YP_002946852 |
Protein GI | 239817942 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.305524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCAG CGCCGGGCCG CTGGTGGCGC CCGCGCTCGC TGCGCACGCA GCTCCTGTTC TGGCTCGTCA CGCTGCACCT GGTGGCGGCG GCGCTCACGG CGTGGTTCAC CTTCGTGGCC TATGGCGACC TGGTGCACAA CGCGCTCGAC GAACAGATGC GGCTGGTGGC CGATTCCTAT GCGGGCAGCG ACCCGCCGCG CACCCCGCGT TCGCTCGACG GCAACGCCGC GCTCGTGCGC GGCGCCTTCG TGGTGCAGCT CTGGAGCGCG GACGGCCGCA CGCTGCGCGC AAGCTCGTGG CCGCCGCTGG CGGTGGTGCC GCTGCAGCCG CAGCCGGGTT TCAGTGATGC GAGCGCCGAT GCGCCCGCGC CTTCGCGCTG GCGCGTGTTC ACGGCCGAGG CCGGGCCGCG CGCCGACCAG CCGCGCGTGC AGGTGCTGCA GAACGAGGAC TACCGCCGGC GCCGCGCCCT GCGCCGCGCG CTGCTCGAAG GCCTGCCCAT CGCGCTGCTG CTGCCGCTGG CCTTGCTGAT CCTCTGGCTC ATCGTGTCGG CGGCTTCGCG CTCGCTGCGC GCGGTGGCGC GCGACGTGGC CTCGCAGGAC GAGCGCCGCC CCACCGAGCT GTCGCTGGCG CGCGTGCCGG ACGAGATCGC GCCGCTGGTG CAGGCCTTCA ACCAGCTGCT GTCGCGCATG CGCAGTGCCT TCGCCACGCA GCGCCGCTTC GTGCAGGACG CGGCCCACGA GCTGCGCACG CCGATGGCCG CGATCGGCCT GCAGATCGAG AACCTGCGCG CGCACGTGCC CGCGGGCGAA GCCACCGAGC GCTTCAACCA GCTGGAAGCC GGCGTCACGC GCGCGCAGCA CCTCATCGAG CAGCTGCTGA GCCTCTCGCG GCAGGACGCG CCGGGGCGTC CCATGCCGGG CGAGCCGGTC GACATCGAAA CCCTGCTGCG CGAGAGCGTG AGCCAGCTGA TGGTGCTGGC CGATGCGCGG CGCGTGGACA TCGGCTTCGA GGGCTCGATC GCGCCCGTGG TGCAGGCGCC GGCCGCCGAG CTGCGCAGCG TGTTCGACAA CCTGATCGAC AACGCGCTGC GCTATGCGCC CGAAGGCGGC GTGGTCGACG TGCGGCTGCA CGAGGTCGAC GGCCATGCGG TGGTCGATGT GCTCGACAAC GGCCCGGGCA TTCCGGCCTC GGCCATCGGC CGCGTGTTCG ACCGTTTCTT TCGCGTGCCG GGTGCGCCGG TGGGCGGCAG CGGCCTCGGG CTGGCGATTG CGCGCACCGC GGCCGAGCGG CACGGCCTGC GCATCGAGCT GCGCAACCGC GATGAAGCAG AAGAGGGCGG CAGTCCGGGG CTGCTGGCAC GGGTGCACCT GCCTGCGGCA TCAATTCCGC TCACGCCGGG CTAA
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Protein sequence | MTSAPGRWWR PRSLRTQLLF WLVTLHLVAA ALTAWFTFVA YGDLVHNALD EQMRLVADSY AGSDPPRTPR SLDGNAALVR GAFVVQLWSA DGRTLRASSW PPLAVVPLQP QPGFSDASAD APAPSRWRVF TAEAGPRADQ PRVQVLQNED YRRRRALRRA LLEGLPIALL LPLALLILWL IVSAASRSLR AVARDVASQD ERRPTELSLA RVPDEIAPLV QAFNQLLSRM RSAFATQRRF VQDAAHELRT PMAAIGLQIE NLRAHVPAGE ATERFNQLEA GVTRAQHLIE QLLSLSRQDA PGRPMPGEPV DIETLLRESV SQLMVLADAR RVDIGFEGSI APVVQAPAAE LRSVFDNLID NALRYAPEGG VVDVRLHEVD GHAVVDVLDN GPGIPASAIG RVFDRFFRVP GAPVGGSGLG LAIARTAAER HGLRIELRNR DEAEEGGSPG LLARVHLPAA SIPLTPG
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