Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4961 |
Symbol | |
ID | 7974243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5272962 |
End bp | 5273933 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795556 |
Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
Protein accession | YP_002946831 |
Protein GI | 239817921 |
COG category | [R] General function prediction only |
COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCCG CACCGTTCCA CGCCGGCGAG CGCGCGCTGC AGGTACAAAC GGGCTGGCGC GAGCGTATGG AAGCCATGGG CCCGCGCGTG ATCCGCGACT ACATGCCCGA CCAGCACCGC GAATTCTTCG CGCAGCTGCC CTTCCTCGTG GTCGGCAGCC TCAATGCCAA TCTGCAGCCC TGGGCCAGCG TGCTCGCGGC GCCTGCGGGC TTCGCGCATT CGCCCGATGC CACGCACCTG CGCGTCGATG CGCTGCCGGC GGCCGGCGAT CCGCTGGCCG GGCAGCTCGC GCAGGGTGCC ACGCTCGGCC TGCTGGGCAT CGAGCCGCAC ACGCGGCGGC GCAACCGCAT GAACGGCACG GTCGAGTCGC TCGATGCGGG CGGTTTCATG GTCGCTGTGC AGCAGAGCTT CGGCAACTGC CCGCGCTACA TCCAGGCGCG CGAGCCGGAA CTGGTGGCCG CACGCGACGG CGGCGCGCCC GTGCAGCGGC TCGACGCGCT CGACCTCGAC GCACAGCGCC TCATCGGCAG CGCCGACACG CTGTTCATCG CCACCGCGTA CCCGGGCGAT GTGGCCAGCG GCGACGCGGC CGATGCGTGC TCGCACGGTG TCGACGTGTC GCATCGTGGC GGCCGGCCCG GCTTCGTTCG CGTCGACGCG GGCGGCGTGC TCACGGTGCC CGACTTCAAC GGCAACCGCT TCTTCAACAC GCTGGGCAAC CTGGTGGCCC ATCCGCGTGC GGGCCTGCTG TTCATCGACT ACGACAACGG CGATCTGCTG CATGTGGCGG CCACCGCCGA GCTGGTGCTG GACGGCCCCG AGATCGCCGA GTTCGAAGGC GCCGAGCGGC TGCTGCGGCT GCATGTGGAG CACGCACTGC GCCGGCCCGC CGCCCTGCCG TTGCGCTGGG GCGACGCGGC GCTGTCGCCG CACCTCGAAG GCACCGGGCG CTGGGCTGCC GCGCGCGCCT GA
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Protein sequence | MIAAPFHAGE RALQVQTGWR ERMEAMGPRV IRDYMPDQHR EFFAQLPFLV VGSLNANLQP WASVLAAPAG FAHSPDATHL RVDALPAAGD PLAGQLAQGA TLGLLGIEPH TRRRNRMNGT VESLDAGGFM VAVQQSFGNC PRYIQAREPE LVAARDGGAP VQRLDALDLD AQRLIGSADT LFIATAYPGD VASGDAADAC SHGVDVSHRG GRPGFVRVDA GGVLTVPDFN GNRFFNTLGN LVAHPRAGLL FIDYDNGDLL HVAATAELVL DGPEIAEFEG AERLLRLHVE HALRRPAALP LRWGDAALSP HLEGTGRWAA ARA
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