| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4946 |
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| Symbol | |
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| ID | 7974228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5254271 |
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| End bp | 5255605 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795541 |
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| Product | 6-aminohexanoate-dimer hydrolase |
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| Protein accession | YP_002946816 |
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| Protein GI | 239817906 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACGA TCCACTTCAA ACGCACGGCG CTCGCCGCCG TCTTCGCACT GCTCGCCGTG
AACACCACCA CCTCCCTGGC CCAGGCACCC GCCACCTCCC CTCCCGATCC CGCGGCCACC
TCGGTCGAGG CGATGGGCTG GATGAAGGGC TTTCCGCCCC CTCCCGACAG GCTCATCACC
TTCGACGATC CGGCGGGCGG CGTGTTTCCG CGCACGCGCT GGAGCTTCTC GCATGTGCGC
GAAACCGTGC CCACGGCCAA CGTGTGGCGC GGCAGCGGCG CGCCGAGCCC CCTGCCGGCC
GCGCCGCGCA GCGACCTCGA GGCCGTGACC TTCAAGCCGC TGGGCAGCGA GGAGACGCTG
AGCTTCGGCC AGATGATCCC GCGCACCTAC ACCGACGGCA TCCTGGTGCT GCACCGCGGC
CGCGTGGTCT ACGAAAAATA CTTCGGCGCC CTCACGCCCG AGCGGCCGCA CATTGCGATG
TCGGTCACCA AGTCCTTTGT CGGCACGCTG GCGGCCATCC TCGCGGACGA GGGCAGGCTC
GACCCGTCGG CGCCGGTCAC GCGCTACCTG CCCGAGCTCA AGGACACGGC CTATGGCGAC
GCCACGGTGC GCCAGGTGAT GGACATGACC ATCGGCGTGC ACTACTCCGA GAACTACGCC
GACCCGAAGG CCGAGATCTG GGACTACGCG CGCGCCGGCG GCATGCTGGC GCAAGGCCCG
AACTACACGG GCCCGAAGTC CTTCTACGAA TTTCTCGCCA CGCTGAAGAA GGAAGGCGCG
CACGACGCCG CCTTTGCCTA CAAGACGGTG AACGCCGAGG TGCTCGCCTG GATCCTGCGC
CGCGCCAGCG GCCAGCCGCT GGCCGACCTG CTGAGCGAGA AGATCTGGCG CCGCATCGGC
GCCGAGCAGG ACGCCTACTT CATGGTCGAC CGCATCGGCA CCGAGTCGGG CGGCGGCGGC
CTCAACACCG TGCTGCGCGA CCTCGCGCGC TTCGGCGAGA CCATGCGTAA CGGCGGCCGC
GCGCCCAACG GGCAGCAGGC CATTCCCAAG GCGGTGGTCG AGGACATCGC GCGCGGCGCC
GATCCGGCCA AGTTCGCCAA GGCCGGCTAC GCGCTGCTGC CGGGCTGGTC GTACCGCAAC
ATGTGGTGGG TCACGCACAA CCCGCACGGC GCCTACATGG CGCGCGGCAT CCACGGCCAG
AGCATCTACG TCGATCCGAA GGCGGAAATG GTGATCGTGC GCTATGCCGC GCACCCGGTG
GCGGCCAGTG CGGGCAACGA TCCGCTCACG CTGCCGGCCT TCCAGGCCGT GGCCGAGGCG
CTGATGCGGC CCTGA
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| Protein sequence | MMTIHFKRTA LAAVFALLAV NTTTSLAQAP ATSPPDPAAT SVEAMGWMKG FPPPPDRLIT
FDDPAGGVFP RTRWSFSHVR ETVPTANVWR GSGAPSPLPA APRSDLEAVT FKPLGSEETL
SFGQMIPRTY TDGILVLHRG RVVYEKYFGA LTPERPHIAM SVTKSFVGTL AAILADEGRL
DPSAPVTRYL PELKDTAYGD ATVRQVMDMT IGVHYSENYA DPKAEIWDYA RAGGMLAQGP
NYTGPKSFYE FLATLKKEGA HDAAFAYKTV NAEVLAWILR RASGQPLADL LSEKIWRRIG
AEQDAYFMVD RIGTESGGGG LNTVLRDLAR FGETMRNGGR APNGQQAIPK AVVEDIARGA
DPAKFAKAGY ALLPGWSYRN MWWVTHNPHG AYMARGIHGQ SIYVDPKAEM VIVRYAAHPV
AASAGNDPLT LPAFQAVAEA LMRP
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