| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4899 |
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| Symbol | |
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| ID | 7971593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5213988 |
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| End bp | 5215235 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795494 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002946769 |
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| Protein GI | 239817859 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG GCCTGCTTGC CGGACGGCGG CGCATCGCCA CCGTCTTCCT GGCCTTTGCC
TTCGCCTATT TCCTTTCGAC GCTGGTGCGC GCCATCACGG CCACGCTGTC GCCCGCGCTC
ACCGCCGAGT TCGGACTCGA GTCGCGCGAC CTTGGATTGC TCGCGGGCGG CTATTTCCTG
GGTTTCGCGT TCACGCAGCT GCCCATGGGC ACCTGGCTCG ACCGCCATGG GCCCAAGCGC
GTGATCGTCT GCTTCCTGTC TGCCGCGGTG GCCGGCTGCC TTCTGTTTTC GGTGGCCACG
CATTTCTGGC TGCTGCTGGC GGCGCGCGTG CTCACCGGCG TCGGCGTGAG CGCCTGCCTG
ATGGCGCCGC TCACCGGCTA CCGGCGCTGG CTGACGCCGC CCATGCAGCT GCGCAGCAAT
TCGTGGATGC TGATGGTGGG CTCCTTCGGC CTGGTCGGCG CGACCTTGCC GGTGCAGTGG
CTCATGCCCT ACCTCGGCTG GCGGCCGCTG TTCTGGCTGC TGGCGGCGGG CGCGCTCGTG
TCGATGGTGC TGATCGCATG GGCCGCGCCG GCATGGCATG ACGGCGCCGC CACCCGGGAA
AAGAACCAGG GCGGAGGCAG CTATGCGGCC GTGTGGCGCG ATCCCTTCTT CCGCAAGCTC
GCGCCGATCG GCTTCTTCAA CTACGGCGGC TTCGTCGCGA TGCAGACGCT CTGGGTCGTG
CCATGGCTCA CGCGCGTGGC GGGCTACACG CCCCAGGAGG CCGCCGGCGC GCTGTTCTGG
ATCAGCATCG CGCTGCTCGC CACCTATGGG CTCTGGGGCA TGGTCAATCC GCGGCTCGCG
CACCGCGGCA TTCCCGCCGC CCGGCTGCTG GCCTGGGGCA TGCCGCTCGG GATGCTCGTG
CTTGCTCTGG TTTTGATAGC TGGCCCGGCG GCGGGGACGA TGGCCTGGGT GGTCTTCCTG
TGCGTTTCCA CCGTTGTCAC GCTGGCCCAG CCCGCCGTCG CCCTGGCCTT GCCGACTGCG
CTCGCGGGTC GCGCGCTGTC GGCCTACAAC CTGGTGGTCT TTGCAGGCGT ATTTGTCGTG
CAGTGGGGCA TCGGCCTGCT GATCGACCTG TTCGCCAGCG CCGGGCTCGA CCAGGCGGCG
TCATTCCGTG CGGCGCTGTC CGTTTTCCTC GCCTGCTGCG TTATGTCGTA TGTCTACTTC
CTTTGGGCGC CCCCGCATAA TCGGTGCGTA GTCCCCCGAC CCGCATGA
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| Protein sequence | MSGGLLAGRR RIATVFLAFA FAYFLSTLVR AITATLSPAL TAEFGLESRD LGLLAGGYFL
GFAFTQLPMG TWLDRHGPKR VIVCFLSAAV AGCLLFSVAT HFWLLLAARV LTGVGVSACL
MAPLTGYRRW LTPPMQLRSN SWMLMVGSFG LVGATLPVQW LMPYLGWRPL FWLLAAGALV
SMVLIAWAAP AWHDGAATRE KNQGGGSYAA VWRDPFFRKL APIGFFNYGG FVAMQTLWVV
PWLTRVAGYT PQEAAGALFW ISIALLATYG LWGMVNPRLA HRGIPAARLL AWGMPLGMLV
LALVLIAGPA AGTMAWVVFL CVSTVVTLAQ PAVALALPTA LAGRALSAYN LVVFAGVFVV
QWGIGLLIDL FASAGLDQAA SFRAALSVFL ACCVMSYVYF LWAPPHNRCV VPRPA
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