| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4869 |
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| Symbol | |
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| ID | 7971563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5188448 |
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| End bp | 5189848 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795464 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_002946739 |
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| Protein GI | 239817829 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG GAAAAATTGT CCAATGTATC GGCGCCGTGG TCGACGTGGA GTTCCCGCGT
GACCAGATGC CCAAGGTCTA TGACGCCTTG AAATTCGAAG GCGGCGGGCT GACCCTCGAA
GTCCAGCAGC AGCTCGGCGA CGGCGTGGTG CGCACCATTG CGCTCGGCTC GTCCGACGGC
CTGCGCCGCG GCCTGATCGT CACCAACACC GGCGCACCCA TCACGGTGCC CGTCGGCAAG
GCCACGCTCG GCCGCATCAT GGACGTGCTC GGCCGTCCGA TCGACGAGCG CGGCGACGTG
AGCCAGGACC TCACCGCATC GATCCACCGC AAGGCCCCCG CATACGACGA ACTGTCGCCT
TCGCAGGACC TGCTGGAAAC CGGCATCAAG GTGATCGACC TCGTGTGCCC GTTCGCCAAG
GGCGGCAAGG TGGGCCTGTT CGGTGGTGCC GGCGTGGGCA AGACCGTGAA CATGATGGAA
CTCATCAACA ACATCGCCAA GGCTCACTCG GGCCTGTCGG TGTTCGCCGG CGTGGGTGAA
CGTACCCGCG AAGGCAACGA CTTCTATCAC GAGATGGCCG ACTCCGGCGT CGTGAACCTC
GAGAAGCTCG AAGACTCGAA GGTCGCCATG GTCTACGGCC AGATGAACGA GCCCCCGGGC
AACCGCCTGC GCGTGGCCCT GACCGGCCTG ACCATCGCCG AGTCGTTCCG CGACGAAGGC
CGCGACGTGC TGTTCTTCGT GGACAACATT TACCGCTACA CGCTGGCCGG TACCGAAGTG
TCGGCTCTGC TGGGCCGCAT GCCTTCCGCC GTGGGCTACC AGCCGACGCT GGCCGAGGAA
ATGGGCCGCC TGCAGGAGCG GATCACGTCG ACCAAGGTTG GCTCGATCAC CTCGATCCAG
GCCGTGTACG TGCCGGCCGA CGACTTGACC GACCCGTCGC CCGCCACCAC CTTCGCCCAC
CTGGACTCCA CCGTGGTGCT GTCGCGCGAC ATCGCTTCGC TCGGTATCTA CCCCGCCGTG
GACCCGCTCG ACTCGACCTC GCGCCAGCTC GACCCGAACG TGGTCGGCGA AGAGCACTAC
AACGTGGCCC GCGCCGTGCA AGGCACGCTG CAGCGCTACA AGGAACTGCG CGACATCATC
GCGATTCTGG GCATGGACGA ACTGGCACCG GAAGACAAGC TGGCCGTGGC CCGCGCGCGC
AAGATCCAGC GCTTCCTGTC GCAGCCGTTC CACGTGGCCG AAGTGTTCAC GGGTTCGCCC
GGCAAGTACG TGCCGCTGGC CGAAACCATC CGCGGTTTCA AGATGATCGT GAACGGCGAA
GCCGACCACC TGCCGGAACA AGCGTTCTAC ATGGTGGGCG GCATCGACGA AGCGTTCGAA
AAGGCCAAGA AGGTCGCTTA A
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| Protein sequence | MAEGKIVQCI GAVVDVEFPR DQMPKVYDAL KFEGGGLTLE VQQQLGDGVV RTIALGSSDG
LRRGLIVTNT GAPITVPVGK ATLGRIMDVL GRPIDERGDV SQDLTASIHR KAPAYDELSP
SQDLLETGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LINNIAKAHS GLSVFAGVGE
RTREGNDFYH EMADSGVVNL EKLEDSKVAM VYGQMNEPPG NRLRVALTGL TIAESFRDEG
RDVLFFVDNI YRYTLAGTEV SALLGRMPSA VGYQPTLAEE MGRLQERITS TKVGSITSIQ
AVYVPADDLT DPSPATTFAH LDSTVVLSRD IASLGIYPAV DPLDSTSRQL DPNVVGEEHY
NVARAVQGTL QRYKELRDII AILGMDELAP EDKLAVARAR KIQRFLSQPF HVAEVFTGSP
GKYVPLAETI RGFKMIVNGE ADHLPEQAFY MVGGIDEAFE KAKKVA
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