Gene Vapar_4836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4836 
Symbol 
ID7970307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5155974 
End bp5157032 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content72% 
IMG OID644795431 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002946706 
Protein GI239817796 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.374024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG CCGCGCCGAA TTCTTCTTCC TCTTCCCTGC ACGCGGCCAT GGGCTACATG 
GCGCCGCGCT GGCTGCCCGG CGGCAACCTG CAGACCATCT GGCCGGCGCT CTATGCGCGC
CGCTTCGAGG GCTCTGCGCC GGCCTACCGC CGCGAGCGCT GGACCACGCC CGACGGCGAC
TTCATCGATG TCGACTTCAT CGATGCGGCC TTGCCCGGCC CGCAGCCGCT GCTTGTGCTG
TTCCACGGGC TGGAGGGGTC GTCGCGCAGC CACTACGCCG AAGCCTTCGC GGCCTTTGCC
GCCGCGCAGG GCATGGCCTT TGCCGTGCCG CATTTCCGCG GGTGCAGCGG CGAGCTCAAC
CTGGCGCCTC GCGCCTACCA CTCGGGCGAC TACGAAGAGA TCGGCTGGAT CCTGCAGCGC
ATGCGCGAGC AGCATGCGCA GCGCGGCGGC GGCCCGGTGC TGGCCGCGGG CGTCTCGCTC
GGCGGCAATG CGCTGCTGCG CTGGGCCTGC GAGGCCGGCG ACACGGCCCG CGCCTCGGTG
AATGCGGTGG CTTCGGTGTC CGCGCCGCTC GACCTGGCGG CCGGCGGCGC GGCCATTGGC
CGCGGCTTCA ACCGGCTGGT CTACACGCGC ATGTTCCTTG CCACCATGAA GCCCAAGGCA
CTGGCCAAGC TGGCGCAGTT TCCGGGCCTG TTCGACCGCG AGCGGCTGCT TGCGGCGCGC
GACCTCTATG CCTTCGACGA CGTGTTCACC GCGCCGCTGC ACGGCTTTCG CAACACCGAC
GACTACTGGG CCCGCGGCTC GTCCAAGCCG CACCTGAGGG CGATCCGCGT GCCCACGCTG
GTGGTGAATG CGCGGAACGA CCCGTTCATT CCGGCGCAGA GCCTGCCCGG CCCCGGCGAG
GTCGGCCCGC ATGTCACGCT GTGGCAGCCC GCGCACGGCG GCCACGTGGG CTTTCCGCTC
GGGCCGCCGC CGGGCCATGT GCAGGGCATG CCCGAGCGCG TGGGCGGCTG GCTGGCCGGG
TTTGCACCCT CCACGGCGGC GCAGGCGCGC GCAAAATAA
 
Protein sequence
MTAAAPNSSS SSLHAAMGYM APRWLPGGNL QTIWPALYAR RFEGSAPAYR RERWTTPDGD 
FIDVDFIDAA LPGPQPLLVL FHGLEGSSRS HYAEAFAAFA AAQGMAFAVP HFRGCSGELN
LAPRAYHSGD YEEIGWILQR MREQHAQRGG GPVLAAGVSL GGNALLRWAC EAGDTARASV
NAVASVSAPL DLAAGGAAIG RGFNRLVYTR MFLATMKPKA LAKLAQFPGL FDRERLLAAR
DLYAFDDVFT APLHGFRNTD DYWARGSSKP HLRAIRVPTL VVNARNDPFI PAQSLPGPGE
VGPHVTLWQP AHGGHVGFPL GPPPGHVQGM PERVGGWLAG FAPSTAAQAR AK