Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4836 |
Symbol | |
ID | 7970307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5155974 |
End bp | 5157032 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795431 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002946706 |
Protein GI | 239817796 |
COG category | [R] General function prediction only |
COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.374024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCG CCGCGCCGAA TTCTTCTTCC TCTTCCCTGC ACGCGGCCAT GGGCTACATG GCGCCGCGCT GGCTGCCCGG CGGCAACCTG CAGACCATCT GGCCGGCGCT CTATGCGCGC CGCTTCGAGG GCTCTGCGCC GGCCTACCGC CGCGAGCGCT GGACCACGCC CGACGGCGAC TTCATCGATG TCGACTTCAT CGATGCGGCC TTGCCCGGCC CGCAGCCGCT GCTTGTGCTG TTCCACGGGC TGGAGGGGTC GTCGCGCAGC CACTACGCCG AAGCCTTCGC GGCCTTTGCC GCCGCGCAGG GCATGGCCTT TGCCGTGCCG CATTTCCGCG GGTGCAGCGG CGAGCTCAAC CTGGCGCCTC GCGCCTACCA CTCGGGCGAC TACGAAGAGA TCGGCTGGAT CCTGCAGCGC ATGCGCGAGC AGCATGCGCA GCGCGGCGGC GGCCCGGTGC TGGCCGCGGG CGTCTCGCTC GGCGGCAATG CGCTGCTGCG CTGGGCCTGC GAGGCCGGCG ACACGGCCCG CGCCTCGGTG AATGCGGTGG CTTCGGTGTC CGCGCCGCTC GACCTGGCGG CCGGCGGCGC GGCCATTGGC CGCGGCTTCA ACCGGCTGGT CTACACGCGC ATGTTCCTTG CCACCATGAA GCCCAAGGCA CTGGCCAAGC TGGCGCAGTT TCCGGGCCTG TTCGACCGCG AGCGGCTGCT TGCGGCGCGC GACCTCTATG CCTTCGACGA CGTGTTCACC GCGCCGCTGC ACGGCTTTCG CAACACCGAC GACTACTGGG CCCGCGGCTC GTCCAAGCCG CACCTGAGGG CGATCCGCGT GCCCACGCTG GTGGTGAATG CGCGGAACGA CCCGTTCATT CCGGCGCAGA GCCTGCCCGG CCCCGGCGAG GTCGGCCCGC ATGTCACGCT GTGGCAGCCC GCGCACGGCG GCCACGTGGG CTTTCCGCTC GGGCCGCCGC CGGGCCATGT GCAGGGCATG CCCGAGCGCG TGGGCGGCTG GCTGGCCGGG TTTGCACCCT CCACGGCGGC GCAGGCGCGC GCAAAATAA
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Protein sequence | MTAAAPNSSS SSLHAAMGYM APRWLPGGNL QTIWPALYAR RFEGSAPAYR RERWTTPDGD FIDVDFIDAA LPGPQPLLVL FHGLEGSSRS HYAEAFAAFA AAQGMAFAVP HFRGCSGELN LAPRAYHSGD YEEIGWILQR MREQHAQRGG GPVLAAGVSL GGNALLRWAC EAGDTARASV NAVASVSAPL DLAAGGAAIG RGFNRLVYTR MFLATMKPKA LAKLAQFPGL FDRERLLAAR DLYAFDDVFT APLHGFRNTD DYWARGSSKP HLRAIRVPTL VVNARNDPFI PAQSLPGPGE VGPHVTLWQP AHGGHVGFPL GPPPGHVQGM PERVGGWLAG FAPSTAAQAR AK
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