Gene Vapar_4835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4835 
Symbol 
ID7970306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5155417 
End bp5155968 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID644795430 
Producthypothetical protein 
Protein accessionYP_002946705 
Protein GI239817795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.261527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACA TCGTCAAACA GGCGCTCGCC AAGTGGCCCA ACGTGCCGCA CTGCTACGGC 
TGGCTCGGCC TGGACGCGCG CGGCAACTGG TACATGCGCG ACGACCGCAC GCAGGCCGAA 
GGCGCCTTCC CCGCGGCCAA GGGCTCGATG CTGCGGCACG AGAAGCTGAT CGACTTCATC 
CAGCGCAACT ACGACCACGA CGACGAGGGC CAGTGGTTCT TCCAGAACGG CCCGCAGCGC 
GTGTATGTCG AACTGGAGGC CGCGCCCTTC GTCTGGCGCA TTGCCGATGG CGCGGGCTTT 
GCCGTCACGG CCCACACCGG GCAGGCGGCG GGCGCCATCT CGGCCTGCCT GCTCGACGAG 
CACGGGCGCC TTTTCCTGGC GGCGCCCCTC GGGGTCGGGC TGGTCCATAC GCAGGACGTG 
GGCCTAGCCG CCGACGCGGT GGAGCAGGGC CTGTGGACCC CCGAGCCGGT GCATGCGGCC 
GACCTGCCGC AGCGCTTCGG CCATGTGCTG AGCCCCTCGG CGCGCCGGCT CGTCTTGCTA 
TCAAATGAGT AG
 
Protein sequence
MDDIVKQALA KWPNVPHCYG WLGLDARGNW YMRDDRTQAE GAFPAAKGSM LRHEKLIDFI 
QRNYDHDDEG QWFFQNGPQR VYVELEAAPF VWRIADGAGF AVTAHTGQAA GAISACLLDE 
HGRLFLAAPL GVGLVHTQDV GLAADAVEQG LWTPEPVHAA DLPQRFGHVL SPSARRLVLL 
SNE