| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4817 |
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| Symbol | |
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| ID | 7970287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5136033 |
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| End bp | 5136677 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795412 |
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| Product | phosphoheptose isomerase |
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| Protein accession | YP_002946688 |
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| Protein GI | 239817778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0279] Phosphoheptose isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAGC AACGGATTCA GCAACACTTC ATCGACAGCG CCGACCTCAA GTACCAGGCC
GGCCCCATCC TCAGCAAACC CATTTCGCAG GCCATGCAGG CGATCCTGGC CTGCGTGACC
AGCGGCGGCA AGGTGCTGGC CTGCGGCGCG GGCGTCTCGG GCCTGCTGGC GGCGCAGTTC
GCGGCGCAGT TCGTCGGCCG CTTCGAGCGC GAGCGCCCCG AGCTCGGCGC CATCGCGCTG
CCCGGCGATC CCACCGACCC GTCGGCCGAC AGCGCCGCTG CCACCGACGT CGACCGTTTC
GCCCGCCAGG TGCGCGCGCT CGGCCAGGCC GGCGACGTGC TGCTGGCGCT GAGCGCGAGC
GGCCAGTCGG CGGCCGTGCT GGCCGCGGTG CTGGCTGCGC ACGAGCGCGA CATGACGGTG
GTGGCGCTGC TGGGCAACGC CAGCGCGGGC CAGCCGGCCT CGCCCGGCGC GGGCAGCAGC
GGAACCGGTG GCGCCATCGG CCGCGCGCTG CGCGAAACGG ACGTCCAGAT CGGCGTGTCG
CACGAACGTG CGGCGCGTAT CCACGAAATC CACCTGCTCG CGCTGCATTG CCTGTGCGAC
GGCGTGGATG CCCAGCTACT CGGAGAACAG GAAGCTTCCA CATGA
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| Protein sequence | MLEQRIQQHF IDSADLKYQA GPILSKPISQ AMQAILACVT SGGKVLACGA GVSGLLAAQF
AAQFVGRFER ERPELGAIAL PGDPTDPSAD SAAATDVDRF ARQVRALGQA GDVLLALSAS
GQSAAVLAAV LAAHERDMTV VALLGNASAG QPASPGAGSS GTGGAIGRAL RETDVQIGVS
HERAARIHEI HLLALHCLCD GVDAQLLGEQ EAST
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