Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4762 |
Symbol | |
ID | 7971772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5059718 |
End bp | 5061307 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795347 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_002946633 |
Protein GI | 239817723 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.219906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGC CGGCAGCGGC CACGCTCCGC ACGTCTCCCG CCTTTTCCGC CGTGGGCCTG CTGCGCCTGC TGGCCTTTGC CTTCGCGGGC CTCGCCCAGG CCGCGGCCAT TGCCTGGCCT GCGAACGGCC GGCCGCTGTG GTGGCTGCAG CTTGTTTCGC TGGCGGTGCT CGTCGGACTG CTGGACTGGC TGCGCGCCGA GGGTGCGGGC TGGCGCCGCG CCGGGCTGCA TGGCTGGCTT TTCTCGACCG CCTGGCTCAC CGGCAGCTTC TGGTGGCTAT TCATTTCGAT GCACACCTAC GGCGGGCTGC CGGCGCCGCT CGCGGCCATT GCGGTGCTCT CGCTCGCGGC CGCGCTCGGG CTCTATTACG CGGTGGCCTG CGCCTGGTTC GTCGTTCGCG GGCCGCGCGG GCCGGTGGCC GGGGCGCTGG TGTTCGCCGC GCTGTGGACG CTGGCCGAGC TCGTGCGCGG CAGCTGGTTC ACCGGCTTTC CCTGGGGCGC CGGCGGCTAT GCGCACGTCG AGGGGCCGCT GGCGGCCTGG GCGCCGTGGA TCGGCGTGTA CGGCATCGGC GCGGTGGCCG CGCTGGTGGC CGCGCTGGTG GCGCTGACCC GGCCCGCGCG CGGCATCGCG CTCGCGCAGG CCCTGGCGCT GGTCGCCGCT GCATTCGCCG CGCCGCACCT CGTGGCACCG CTGTCCGGCG ACGCGCAGGG CGCCAGGGGT TCGAGCGGCA AGCTGCAGCT CGCGCTGCTG CAGGGCAACA TCCCGCAGGA CGAAAAATTC ATTCCGGGCG GCGGCATCGA CCTGGCGCTG CGCTGGTATG GAGAGCAGCT GCGCGATGCC AAGGCCTCGC TCGTGGTGAC CCCCGAAACC GCACTGCCGC TGCTGCCGCA GCAACTGCCC GAGGGCTACC TGGAGGCGAT CCAGGCGCGC TACAGCCAGG GCACGCAGGC GGCCATCGTC GGCCTGCCGC TGGGCCGCCA GGGCACCTAC AGCAACGCGG TGCTCGGCTT CCAGCCCGGT GCGGCGCAGC CCTACCGCTA CAGCAAGCAC CACCTGGTTC CGTTCGGCGA ATTCATTCCG CCGGGCTTTC GCTGGTTCAT CCGCATGATG AACATCCCGC TCGGCGACTT CGCGCGCGGC GGCCTGGCGC AGGCGCCCTT TGCCTGGCAG GGCCAGCGCA TTGCGCCGAA CATCTGCTAC GAAGACCTGT TCGGCGACGA GATCGGCGCC AACTTCAAGG ACGAGGCCAC GGCGCCGACC ATCCTGCTCA ACGTGAGCAA CATCGCGTGG TTCGGCAACT CGGTGGCCAT CGACCAGCAC CTGGCCATCT CGCGCATGCG CTCGCTCGAA TTCGCGCGGC CGATGGTGCG CGCCACCAAC ACCGGCGCCA CGGTGGTCAT CGATGCCGAA GGCCGCGTCA CGCACCAGCT GCCGCGGCTC ACGCGCGGCG TGCTCGAGGC CTCGGTCGAA GGCCGGACGG GGCTCACGCC CTTTGCGCGC TGGGTCGCGC ACTTCGGGCT GTGGCCGCTG TGGATTGCGG CGATCGCCAT CATGGCCATC GCCTTCGTGC TGCGCCGGCG CCAGGGCTGA
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Protein sequence | MPLPAAATLR TSPAFSAVGL LRLLAFAFAG LAQAAAIAWP ANGRPLWWLQ LVSLAVLVGL LDWLRAEGAG WRRAGLHGWL FSTAWLTGSF WWLFISMHTY GGLPAPLAAI AVLSLAAALG LYYAVACAWF VVRGPRGPVA GALVFAALWT LAELVRGSWF TGFPWGAGGY AHVEGPLAAW APWIGVYGIG AVAALVAALV ALTRPARGIA LAQALALVAA AFAAPHLVAP LSGDAQGARG SSGKLQLALL QGNIPQDEKF IPGGGIDLAL RWYGEQLRDA KASLVVTPET ALPLLPQQLP EGYLEAIQAR YSQGTQAAIV GLPLGRQGTY SNAVLGFQPG AAQPYRYSKH HLVPFGEFIP PGFRWFIRMM NIPLGDFARG GLAQAPFAWQ GQRIAPNICY EDLFGDEIGA NFKDEATAPT ILLNVSNIAW FGNSVAIDQH LAISRMRSLE FARPMVRATN TGATVVIDAE GRVTHQLPRL TRGVLEASVE GRTGLTPFAR WVAHFGLWPL WIAAIAIMAI AFVLRRRQG
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