Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4748 |
Symbol | |
ID | 7971758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5046492 |
End bp | 5047562 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644795333 |
Product | L-asparaginase, type II |
Protein accession | YP_002946619 |
Protein GI | 239817709 |
COG category | [E] Amino acid transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCTTT CCCCCCGTTT CCGCGCCTTC GCGGCCGGTG CCGCACTGCT CGCGGCCAGC GCCCTGGCGC AAGCCCAGCA GGCGTTGCCC AATGTGGTGA TCCTGGCCAC CGGCGGCACC ATCGCGGGCG CCGGCGCCTC GGCCGTCAAC AGCGCCACCT ACGCGGCCGC CAAGGTCGGC GTCGAGAAGC TGATCGCCGG CCTGCCCGAG CTCTCCAAGA TCGCCAACGT GCGCGGCGAG CAGGTGTTCC AGGTCGCTTC CGAAAGCCTC ACCAACGACA ACCTGCTGAC GCTCGCCAAG CGCGTCTCGG CGCTGTCGAA GCAGGCGGAC GTGGACGGCA TCGTCATCAC CCACGGCACC GACACGCTCG AGGAAACCGC CTACTTCCTC ACGCTCACCG TGCACACCAG CAAGCCGATC GTGGTGGTCG GCTCGATGCG CCCGGGCACG GCCCTTTCCG CCGACGGTGC GCTCAACCTG TACGACGCCG TCAGCGTGGC CGGCAGCAAG GACGCGGCGG GCAAGGGCGT GCTCGTGACG ATGAACGACA ACATCGACAG CGGCCGCGAC GTGAGCAAGA ACGTCAACAT CAAGACCAGC GCCTTCTCGA GCCAGTGGGG CCCGCTCGGC ATGGTGGTCG AGGGCAAGAA CTACTGGTTC CGCGCGCCGG TCAAGCGCCA CACCATGAGT TCGGAGTTCG ACATCGACGC CATCACCGCG CTGCCGCCGG TCGAGATTGC GATGGGCTAC GAGGGCGTCT CGTCCATCGC CATCGACGCG CTGGCCAAGA GCGGCGTGAA GGCGATCATC CATGGCGGCA CGGGCAACGG CTCGGTGGCC AACCGCATCG TGCCCAACCT GCAGAAGGCG CGCACCGACG GCGCAATCAT CATCCGCAGC TCGCGCGTGC CCGACGGCTT CGTGATCCGC AATGCCGAGC AGCCCGACGA CAAGTACGAC TGGGTGGTGG CGCACGACCT GCGTCCGCAG AAGGCGCGCA TCCTGGCGAT GGTGGCGCTG ACCAAGACCA GCGACACCAA AGAGCTCCAG CGCATCTTCT GGGAGTATTG A
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Protein sequence | MYLSPRFRAF AAGAALLAAS ALAQAQQALP NVVILATGGT IAGAGASAVN SATYAAAKVG VEKLIAGLPE LSKIANVRGE QVFQVASESL TNDNLLTLAK RVSALSKQAD VDGIVITHGT DTLEETAYFL TLTVHTSKPI VVVGSMRPGT ALSADGALNL YDAVSVAGSK DAAGKGVLVT MNDNIDSGRD VSKNVNIKTS AFSSQWGPLG MVVEGKNYWF RAPVKRHTMS SEFDIDAITA LPPVEIAMGY EGVSSIAIDA LAKSGVKAII HGGTGNGSVA NRIVPNLQKA RTDGAIIIRS SRVPDGFVIR NAEQPDDKYD WVVAHDLRPQ KARILAMVAL TKTSDTKELQ RIFWEY
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