Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4747 |
Symbol | |
ID | 7971757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5045555 |
End bp | 5046376 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644795332 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_002946618 |
Protein GI | 239817708 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATGG AAGCCCCTGC ACTCGTTCTT CTCGCCCGCC AGCTGGGCGA GCATTCGCTG GCCTGGTTCG CCGGCGCCTT CGCCGTCTCG GTGCTCGGCG CCGGCCTGGC CTGCCGGGCG CTGCAGCGGC GGCGCCTCAG GAGATCGCCG GCCGATGAGC CCGACGAACC GCGGCTGGCC GCCGGGCTGG CCATCGGCTT CCTGTCGATC CTCGGGGCGG CCAGCCTGGT GGCATACATC GCATCGAAGC TCGGCGACGG GCGCCTGCTG GGCCTGGCCG ACCAGGCGCT GGCCGATGCC ATCGGCGAGC ACCTGCCGTG GGCGGCGCTG GTGGCTTTCA GCTGGCTTAC GCACCTGGGC GATGCCGAAC TGCTGGCGCC GGTGTGCGTG GTGGTGGCGC TGCTGCTGTG GCGCCGCGCG CACCACGGCC TGGCGCTGGG CTGGGTCATG GCGCTCGGCG GCATCGTGCT GCTGAACCCG GCGCTCAAGC GCATCTTCGC GCGCGCGCGG CCGCTGCACG ACCACGGGCT GGCGCTGGAG ACGAGCTACA GCTTCCCGAG CGGCCACAGC GCGGGCGCGA TCGTGAGCTA CGGCATGCTG TTGTACTTGG CGCTGCGCCT GCTGCCGGCG CGCTGGCATG TGCCGGCGGC CATGGCGGCC GCCGCCGCCA TCGTCACCAT CGCGTGCAGC CGCGTGTTCT TGCAGGTGCA TTTCGCAAGC GACGTGGCGG CCGGCCTGCT GACCGGCCTG GCCTGGCTGC TCGTGTGCGT GGGCAGCCTC GAATACGCGC GGCACCGCAA GCGCCGGCGC ATCCGCCCCT GA
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Protein sequence | MPMEAPALVL LARQLGEHSL AWFAGAFAVS VLGAGLACRA LQRRRLRRSP ADEPDEPRLA AGLAIGFLSI LGAASLVAYI ASKLGDGRLL GLADQALADA IGEHLPWAAL VAFSWLTHLG DAELLAPVCV VVALLLWRRA HHGLALGWVM ALGGIVLLNP ALKRIFARAR PLHDHGLALE TSYSFPSGHS AGAIVSYGML LYLALRLLPA RWHVPAAMAA AAAIVTIACS RVFLQVHFAS DVAAGLLTGL AWLLVCVGSL EYARHRKRRR IRP
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