| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4743 |
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| Symbol | |
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| ID | 7971753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5040462 |
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| End bp | 5042600 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795328 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_002946614 |
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| Protein GI | 239817704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCG TGCAAAAGAA CCTGTTGGTC GAACTCTTCG TCGAAGAGCT GCCGCCCAAG
GCCCTGAAGA AACTCGGCGA TGCCTTCGCC GGCGTGCTGC GCGACCAGCT CGTGGCCCAG
GGGCTCGCCG AGCCCGCCTC GGTGCTCACG GCCTACGCGT CGCCGCGCCG CCTCGCTGCG
CACCTCACGC ACGTGGCCGA GCGCGCCGCC GACAAGGCCG TCTCGCAAAA GCTCATGCCC
GTGGCCGTGG GGCTCGACGC CTCGGGCCAG CCCACGCCCG CCTTGCTGAA GCGCCTGGCC
GCGCTGGGCG CCGACGCCTC GGCCGTGCCT GGCCTGAAGC GCGCGATGGA CGGCAAGGCC
GAAGCGCTGT TCTACGAAAG CACCGCCAAG GGCGCAACGC TGGCTGAAGG CCTGCAGAAG
GCGCTGGCCG AGGCCATTGC CAAGCTGCCG ATTCCCAAGG TGATGAGCTA CCAGCTCGAA
AGCGGCTGCG AGCTGCCCGG CTGGAGCAGC GTGAGCTTCG TGCGCCCCGC GCATGGCCTG
GTGGCGCTGC ATGGCGATGC CGTGGTGCCA GTCGAGGCGC TTGGCCTCCA GGCCGGCCGC
GAGACCCACG GCCACCGCTT CGAGGCGGCC GTCGATCCGG TCGTGCTGCG CGACGCCAAC
AGCTATGCGC TGCAGATGCA GGACGAGGGC GCGGTCATCG CGAGCTTCGA AGCGCGCCGC
ACCGAGATCG CGCGCCAGCT CGCGGCCGCG GCCGTGCGGG TCGGCGGCGC TGCCGTGCCC
ATCCATGACG ACGCGCTGCT CGACGAAGTG ACCGCGCTGG TCGAGCGGCC CAACGTGCTG
GTCTGCAGCT TCGAGCGCGA ATTCCTCGAA GTGCCGCAGG AGTGCCTCAT CCTCACGATG
AAGGCCAACC AGAAGTACTT TCCGCTGCTG GACGCCTCGA ACCGGCTCAC CAACAAGTTC
CTGGTGGTCA GCAACATCAG CCCGGAAGAT GCGAGCGCGG TGGTCGGCGG CAACGAGCGC
GTGGTGCGTC CGCGCCTGGC CGACGCCAAG TTCTTCTTCG ACCAGGACCG CAAGAAGTCG
CTGGCCTCGC GCGTCGAATC GCTGGGCAAG GTGGTCTATC ACAACAAGCT CGGCACCCAG
GGCGAGCGCG TCGAACGCGT GATGCGCATT GCGCGCGGCA TCGCCGAAAA GCTCGGCGGC
GCCGCGCTCG TCGCGCATGC GGTGCAGGCC GCGCAGCTGG CCAAGGCCGA CCTCGTGACC
GACATGGTCG GCGAGTTCCC GGAGCTGCAG GGCACCATGG GCCGCTACTA CGCGCTGCAC
GACGGCCTCG CTGCCGAAGT GGCCGACGCG ATCGAAGACC ACTACAAGCC GCGCTTTGCC
GGCGACGAGC TGCCGCGCAA CAGCGTGGGC CTGGTGGTCG CACTGGCCGA CAAGCTCGAG
ACGCTGGTCG GCATGTTCGG CATCGGCAAC CTGCCCACCG GCGACCGCGA TCCCTTCGCG
CTGCGCCGCC ATGCGCTCGG CGTGATCCGC ATGCTGATCG AGAAAGACCT GCCGCTGAAG
CTCGACGCGC TGCTGCAGGA CGCCGCCGCG CAGTTCAAGG ACATCGACGG CTTCGACACC
GGCAAGGCCA CGGCCGAGCT GCAGGACTTC ATCCTCGACC GCCTGGCCGG CAGCCTGCGC
GAGCAGGGCG CCAGCGCGCA GGAAGTCGAC GCCGTGCTGG CGCCGCGGCC GCAGCGCCTG
GGCGAGGTGC CCAAGCTGCT GGCGGCCGTG CGCGCCTTTG CCGCGCTGCC AGCCGCCGCC
GCGCTGGCCG CCGCCAACAA GCGCATCGGC AACATCCTCA AGAAGGCGCC CGAGGCCGAC
GCGCACGTCA GCGAGCTGCT GCTGAAGGAG CCCGCCGAGA AGGCGCTGCA TGCCGCCATG
GCCGAGGTCG TGCCCGCCGC CAATGCCCAG TTCGATGCCG GCGACTACAC CGCTTCGCTG
CAGACCCTGG CCGCGCTGCG CGAGCCGGTC GATGCCTTCT TCGACGGCGT GATGGTCAAT
GCCGAGCAGG CCGACCTGCG CCTGAACCGG CTGGGCCTGC TGATGTCGCT GCACGCCGCG
ATGAACCGCG TGGCGCAGCT CGAGCGGCTG GCTGCTTGA
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| Protein sequence | MTSVQKNLLV ELFVEELPPK ALKKLGDAFA GVLRDQLVAQ GLAEPASVLT AYASPRRLAA
HLTHVAERAA DKAVSQKLMP VAVGLDASGQ PTPALLKRLA ALGADASAVP GLKRAMDGKA
EALFYESTAK GATLAEGLQK ALAEAIAKLP IPKVMSYQLE SGCELPGWSS VSFVRPAHGL
VALHGDAVVP VEALGLQAGR ETHGHRFEAA VDPVVLRDAN SYALQMQDEG AVIASFEARR
TEIARQLAAA AVRVGGAAVP IHDDALLDEV TALVERPNVL VCSFEREFLE VPQECLILTM
KANQKYFPLL DASNRLTNKF LVVSNISPED ASAVVGGNER VVRPRLADAK FFFDQDRKKS
LASRVESLGK VVYHNKLGTQ GERVERVMRI ARGIAEKLGG AALVAHAVQA AQLAKADLVT
DMVGEFPELQ GTMGRYYALH DGLAAEVADA IEDHYKPRFA GDELPRNSVG LVVALADKLE
TLVGMFGIGN LPTGDRDPFA LRRHALGVIR MLIEKDLPLK LDALLQDAAA QFKDIDGFDT
GKATAELQDF ILDRLAGSLR EQGASAQEVD AVLAPRPQRL GEVPKLLAAV RAFAALPAAA
ALAAANKRIG NILKKAPEAD AHVSELLLKE PAEKALHAAM AEVVPAANAQ FDAGDYTASL
QTLAALREPV DAFFDGVMVN AEQADLRLNR LGLLMSLHAA MNRVAQLERL AA
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