| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4742 |
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| Symbol | |
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| ID | 7971752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5039846 |
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| End bp | 5040439 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795327 |
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| Product | histidinol-phosphate phosphatase family protein |
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| Protein accession | YP_002946613 |
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| Protein GI | 239817703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCGGCA CTGCCATGAA ACTCGTCATC CTCGACCGCA ACGGCACGAT CAACGTGCAC
CGCGAAGACT TCGTCAAGAG CGACATCGAG TGGACGCCGC TGCCCGGTGC GCTCGAGGCC
GTGGCCCGGC TCAACCATGC GGGCTGGCAT GTGGTGATCG CGTCCAACCA GTCGGGCCTG
GGCCGCGGGC TGTTCGACAT GGCCTCGCTC AATGCCATGC ACGCCAAGAT GCACAAGATG
CTCGCGGCCG TGGGCGGGCG GGTCGATGCG GTCTTCTATT GCCCGCACAG CCCCGACGAG
GGCTGCGATT GCCGCAAGCC CGCGCCGGGC CTGTTCCGCC AGATTGCCGA CCGCTACGGC
ATCGACCTGA AGGACGTGCC CACCGCGGGC GACAGCCTGC GCGACCTGCA GGCCGGCGCG
GCCGCCGGCT GCGAGCCGCA CCTGCTGCTC ACCGGCATGG GCGCGGCCTG CCGCGGCGTC
GATCCGCTGC CTCCCGAATA CCCGGCGAAC ACCGTGGTTC ACGAGAACCT CGCCGCCTTT
GTCGACTTTT TGCTTGCGCG CGAAGCGCAG GCTGCACTGC AGGTGGCTGT CTGA
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| Protein sequence | MGGTAMKLVI LDRNGTINVH REDFVKSDIE WTPLPGALEA VARLNHAGWH VVIASNQSGL
GRGLFDMASL NAMHAKMHKM LAAVGGRVDA VFYCPHSPDE GCDCRKPAPG LFRQIADRYG
IDLKDVPTAG DSLRDLQAGA AAGCEPHLLL TGMGAACRGV DPLPPEYPAN TVVHENLAAF
VDFLLAREAQ AALQVAV
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