| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4714 |
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| Symbol | |
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| ID | 7971724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5009092 |
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| End bp | 5010105 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795299 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946585 |
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| Protein GI | 239817675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACGA TGAAGAACGC GACAACCACG GTCGCGGTGG CAAGCCGCCG CCGTTTCATT
TCCATCGGCG CCGCCGCGGG CCTGGCCGGC GCGGCGCCCT GGGCCTTTGC GCAGGAGGGC
TACCCGAAGC AGCCGATCAA GCTGATCGTG CCCTTCGCGG CCGGCAGCGG CACCGACGCG
GTGGCGCGCA TCACGGCGCA GATGCTGGGC GAGGCGCTCA AGGCCTCGGT CATCGTCGAC
AACCGCGCGG GCGCCAACGG CGTGATCGCT GCCGAGTACG TGGCCAAGGC GCCGCCCGAC
GGCTACACGC TCTTCATGAC CACCAACACC ACGCACTCGG CCAATCCGAG CCTGATGAAG
TCGCTGCCCT ACGACCCGGT GAAGGACTTC GCGCCCGTGA GCCGCATGGG CAACCTGCCG
TTCATGCTGG TGGTCAACAA CGAGCTGCCG GTGAAGAGCG TGGCCGAGCT GCTGGCCTGG
GGCCGCGCGC ACCCGGGCAA GCTGACCTAT GCGAGCGGCA ACAGCACCGG CATCGTGAGC
GGCGCCACGC TCTCGCGCAT GAGCGGCGTG CCGATGCTGC ACGTGCCCTA CAAGAGCACG
CCGCCCGCCA TTGCCGACCT GATCGGCGGG CAGGTGTCGA TGATGGTGGT CGACCTGGCC
GCGGGGCTCG CCACGGTGAA GGCCGGCAAG ATGCGCGCGA TTGCCGTGAC CACGCAGGAG
CGCACCAAGC TGTTTCCCGA ACTGCCGCCG CTGGCCGAGA CGCCCGAGCT CAAGGGCTTC
GACATCACCT CGTGGAACGG CGTGTTCGCG CCGGCCGGCA CGCCGCGCGA TGTGGTGCTG
AAGCTCAACA AGGTGCTGTC GGAGATGGCG AACGGCACGG CCTTCCGCGA GCGCGTGGCG
AAGCTGGGCT TCGATGCCTT CGGCAGCACG CCGGAAGAAC TCGGGGCGTT CACCGTTTCG
GAGCTGGCCA AGTGGAAGAA GCTGATCCAG GCCGCAGGCA TCCAGCCCGA ATGA
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| Protein sequence | MQTMKNATTT VAVASRRRFI SIGAAAGLAG AAPWAFAQEG YPKQPIKLIV PFAAGSGTDA
VARITAQMLG EALKASVIVD NRAGANGVIA AEYVAKAPPD GYTLFMTTNT THSANPSLMK
SLPYDPVKDF APVSRMGNLP FMLVVNNELP VKSVAELLAW GRAHPGKLTY ASGNSTGIVS
GATLSRMSGV PMLHVPYKST PPAIADLIGG QVSMMVVDLA AGLATVKAGK MRAIAVTTQE
RTKLFPELPP LAETPELKGF DITSWNGVFA PAGTPRDVVL KLNKVLSEMA NGTAFRERVA
KLGFDAFGST PEELGAFTVS ELAKWKKLIQ AAGIQPE
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