Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4690 |
Symbol | |
ID | 7971700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4978954 |
End bp | 4979781 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644795275 |
Product | HAD-superfamily hydrolase, subfamily IIB |
Protein accession | YP_002946561 |
Protein GI | 239817651 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCGC CGACTTCCCT TCCGCCCTCG CCCACCCACC TGCTGCCGCT GGACCGCTGG GCCGCGCCCA CGCGCCATGC GCTCGCCGGC GTGTTCACCG ACATCGACGA CACGCTCACC ACCGAGGGCG CGATCACGCC CGATGCACTG CAGGCCCTCG GCGCTCTCAA GGCCGCGGGC CTTGCCATCG TGGCGATCAC GGGCCGGCCC GTCGGCTGGA GCCTGCCCTT CGTCAACACC TGGCCGGTCG ATGCGATCGT GGCGGAGAAC GGCGCGGTGG CGCTGCTGCC CGCGGCCGAT GGCAGGATCG AGAAGCGCTA CATGCAGGAT GCGCCCACGC GCACCGCCAA CTTCGAGCGC ATGCAGGCCG TGCTGGCGCG CATCGAGCGC GAGATCCCGG GCGCGCAGCG CGCCACCGAT TCACCGGGCC GCGAGACCGA CATCGCCATC GACCACAGCG AGTTCGTGCA GCTGGGCGAA GAAACCATCG CACAGGTCGT CGCGCTGATG CGCAGCGAAG GCATGCACGC CACCGTGAGC AGCATCCACA TCAACGGCTG GTACGGCGAC AACGACAAGC TCGAAGGCGC ACGCTGGATC GTGCGCGAGC TCTGGGGCCG AACGCTCGAC GACGAACTCG ACCGCTGGGC CTACGTGGGC GACTCCACCA ACGACCAGCT CATGTTCCGC ACCTTCGCGA GCAGCATCGG CGTGGCAAAC GTCGCGCGCT TCGTGCCGCA GCTGGAGCAC CTGCCGCGCT ACGTGACCGA GGGCGAGCGC GGCGCGGGCT TTGCCGAGGC GGCGCGCGCG GTGCTGTCGG CGCGCTGA
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Protein sequence | MPSPTSLPPS PTHLLPLDRW AAPTRHALAG VFTDIDDTLT TEGAITPDAL QALGALKAAG LAIVAITGRP VGWSLPFVNT WPVDAIVAEN GAVALLPAAD GRIEKRYMQD APTRTANFER MQAVLARIER EIPGAQRATD SPGRETDIAI DHSEFVQLGE ETIAQVVALM RSEGMHATVS SIHINGWYGD NDKLEGARWI VRELWGRTLD DELDRWAYVG DSTNDQLMFR TFASSIGVAN VARFVPQLEH LPRYVTEGER GAGFAEAARA VLSAR
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