Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4646 |
Symbol | |
ID | 7972856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4936950 |
End bp | 4937729 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644795230 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_002946517 |
Protein GI | 239817607 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACG AAAACATCGA AGTGCGGACC GAAGCAGGCA AGGTCGGCAT CATCACCCTC AACCGGCCCA AGGCGCTCAA TGCGCTCAAC GACGCGCTCA TGACCGAGCT GGGCACCGCG CTCAAGGCCT TCGATGCCGA CGACGCCATC GGCTGCATCA TCCTGACCGG CAGCGAACGC GCCTTTGCGG CCGGCGCCGA CATTGCCGCC ATGGCCAAGT ACAGCTTCAT CGACACCTAC AAGGGCGACT ACATCACGCG CAACTGGGAA ACCATCCGCT CGATCCGCAA GCCCGTGATC GCGGCCGTGA GCGGCTTTGC ACTGGGCGGC GGCTGCGAGC TCGCGATGAT GTGCGACTTC ATCATTGCGG CCGACAACGC CAAGTTCGGC CAGCCCGAAA TCAAGATCGG CGTGATCCCG GGCGCCGGCG GCACGCAGCG CCTGCCGCGC GCGGTGGGCA AGAGCAAGGC GATGGACATG GCGCTCACCG CCCGCATGAT GGACGCCGCC GAAGCCGAGC GCGCGGGCCT TGTGAGCCGC GTGGTGCCTT ATGCGCAGCT GGCCGACGAA GCGCTCGGCG CCGCGCTGAT CATCGCGGGC TACTCGCAGA TCGCGGTGAT GGCGGCCAAG GAGTCGGTCA ACCGCGCGTT CGAGAGCGGC CTCTCCGACG GCGTGATGTT CGAGCGCCGG CTGTTCCATG CGCTGTTTGC CACGGCCGAC CAGAAGGAAG GCATGGACGC CTTCCTCGCC AAGCGCCAGC CGGACTTCAA GAACGCCTGA
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Protein sequence | MSYENIEVRT EAGKVGIITL NRPKALNALN DALMTELGTA LKAFDADDAI GCIILTGSER AFAAGADIAA MAKYSFIDTY KGDYITRNWE TIRSIRKPVI AAVSGFALGG GCELAMMCDF IIAADNAKFG QPEIKIGVIP GAGGTQRLPR AVGKSKAMDM ALTARMMDAA EAERAGLVSR VVPYAQLADE ALGAALIIAG YSQIAVMAAK ESVNRAFESG LSDGVMFERR LFHALFATAD QKEGMDAFLA KRQPDFKNA
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