| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4630 |
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| Symbol | purH |
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| ID | 7972840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4920509 |
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| End bp | 4922116 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795214 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_002946501 |
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| Protein GI | 239817591 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.564581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGA CCGCACTCAT CTCCGTCTCC GACAAAACCG GCATCCTCGA ATTCGCGCAA
GCGCTGCATG CGCTGGGCAT CAAGCTGCTG TCCACCGGCG GCACCGCCAA GCTGCTGGCC
GATGCCGGCC TGCCCGTGAC CGAAGTGGCC GACCACACCG GCTTTCCCGA AATGCTCGAC
GGCCGCGTGA AGACGCTGCA CCCCAAGATC CATGGCGGCC TGCTCGCGCG GCGCGACCTG
CCCGCGCACG TGGCGGCCAT CCAGGAACAC GGCATCGACA CCATCGACCT GCTGGTGGTC
AATCTCTATC CGTTCGAAGC CACGGTGGCC AAGGCCGGCT GCACGCTCGA AGACGCAATC
GAGAACATCG ACATCGGCGG ACCGGCCATG GTGCGCAGCG CGGCCAAGAA CTGGAAGGAC
GTGGGCGTGC TGACCGACGC CTCGCAGTAC GCCGTGGCGC TGGCCGAACT CCAGGCCGGC
GGCAAGCTCA GCGACAAGAC CAAGTTCGCG TTCTCGGTGG CCGCGTTCAA CCGCATCGCC
GACTACGACG GTGCCATCAG CGACTATCTC TCGGCCATCG ACTTCGACGC CAGCATCGGC
CAGGCTTCGC CCACGCGCTC GATGTTCCCG GCGCAAAGCA ACGGCCGCTT CGTGAAGGTG
CAGGACCTGC GCTACGGCGA GAACCCGCAC CAGCAGGCCG CGTTCTACCG CGACCTGCAT
CCGGCGCCCG GCTCGCTGGT GTCGGCGAAG CAACTGCAGG GCAAGGAGCT CAGCTACAAC
AACATCGCCG ATGCCGACGC CGCATGGGAA TGCGTGAAGA GCTTCGACGT GCCCGCGTGC
GTGATCGTCA AGCACGCCAA CCCCTGCGGC GTGGCCGTGG GCAAGGACGC GGCCGAAGCC
TACGGCAAGG CCTTCAAGAC CGACCCGACC TCGGCCTTCG GCGGCATCAT CGCCTTCAAC
CGCCCGGTCG ATGGCGAGAC CGCGCAGGCC ATTGCCAAGC AGTTCGTCGA AGTGCTGATG
GCGCCGGGCT ACACGCCCGA GGCGCTCGCC GTGTTCCAGG CCACCAAGGT CAAGCAGAAC
GTGCGCGTGC TCGAGATCGC ACTGCCGCCG GGCGGCACCA CCGACTGGGA CAACGGCCGC
AACCTCATGG ACGTCAAGCG CGTCGGTTCG GGCCTGTTGA TGCAGACCGC CGACAACCAC
GAGCTCGCGG CGAGCGACCT CAAGGTGGTC ACGAAGAAGC AGCCCACGCC CGAGCAACTG
CAGGACCTGC TGTTCGCATG GAAGGTCGCC AAGTACGTGA AGAGCAACGC CATCGTGTTC
TGCGCCGGCG GCATGACCAT GGGCGTGGGC GCGGGCCAGA TGAGCCGCCT CGACTCCGCG
CGCATCGCGA GCATCAAGGC CGAGCATGCG GGCCTCTCGC TGAAGGGCAC GGCGGTGGCG
AGCGACGCCT TCTTCCCGTT CCGCGACGGG CTCGACGTGG TGGTCGATGC CGGCGCGAGC
TGCGTGATCC AGCCGGGCGG CTCGATGCGC GACCAGGAAG TGATTGATGC CGCCGACGAG
CGCGGCGTGG TCATGGTGCT CTCGGGCGTG CGCCACTTCC GGCACTGA
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| Protein sequence | MAQTALISVS DKTGILEFAQ ALHALGIKLL STGGTAKLLA DAGLPVTEVA DHTGFPEMLD
GRVKTLHPKI HGGLLARRDL PAHVAAIQEH GIDTIDLLVV NLYPFEATVA KAGCTLEDAI
ENIDIGGPAM VRSAAKNWKD VGVLTDASQY AVALAELQAG GKLSDKTKFA FSVAAFNRIA
DYDGAISDYL SAIDFDASIG QASPTRSMFP AQSNGRFVKV QDLRYGENPH QQAAFYRDLH
PAPGSLVSAK QLQGKELSYN NIADADAAWE CVKSFDVPAC VIVKHANPCG VAVGKDAAEA
YGKAFKTDPT SAFGGIIAFN RPVDGETAQA IAKQFVEVLM APGYTPEALA VFQATKVKQN
VRVLEIALPP GGTTDWDNGR NLMDVKRVGS GLLMQTADNH ELAASDLKVV TKKQPTPEQL
QDLLFAWKVA KYVKSNAIVF CAGGMTMGVG AGQMSRLDSA RIASIKAEHA GLSLKGTAVA
SDAFFPFRDG LDVVVDAGAS CVIQPGGSMR DQEVIDAADE RGVVMVLSGV RHFRH
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