| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4604 |
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| Symbol | |
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| ID | 7973302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4889094 |
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| End bp | 4889939 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795188 |
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| Product | two component transcriptional regulator, AraC family |
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| Protein accession | YP_002946475 |
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| Protein GI | 239817565 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.514268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATATT GGTCACCCCC GGAGCCCCGG AGAGTTCGTC TTCTGGTGGT CGACGAAGGC
GTCGACGAAG GCGTCGACGA ACTCAAGCCC TTGCTGGAAA CGCTACGGTG CGCCGGCTAC
GGCATCACCC ACGCTTTCGG CGCGATGGAA GGCTATCGGC GCGCGACGGC GCTGCAGATG
GACCTGGTAC TGCTCGACGT GGGTCCGGGC AGCACCGACG GGTTCGCCGC CTGCCGCCTG
CTGAAGGCCG ACCCGGCCAC TGCGGACATT CCGGTGATCT TCCTGACCTC CTCGGCCAGC
TTGGAAGAGC GCTTGACGGG CCTGCGGGCC GGCGCGGTCG ACTACATCGT GAAGCCCTTC
GATCCGGCCG AGGTGATGGC CCGGGTCGAA ATTCATCTGG CACTGGCCGA ATCCCGCAGG
TCGCGCATTG CCCCTGCCAC AAGATCTGCG TCCCCAACCG ACCGCCCTGC GACGAACGAT
GACGGCGCGC CGGGCTCGGA CGTGGACCGC ATGCTCATGC AGGCGGCGGA GCGACTGATC
CTCGCCGACC TGAGCCATGT ATTGCCGCTG CGCGAACTGG CTGCGCGCGT GGGCACGCAC
GAGAAGCGCT TGTCGCGCGT GTTCAAGGAA CTGGCGAACC GCACGGTCTT CGAGTTCGTA
CGCGAGGCAC GGCTGCACGA GGCGCATCGC CTGCTGCTCG AATCGGCCAT GCGCATCGAG
GAGATCGCCG CGGCGGTGGG GTTCTCGAGC GCCGCAAATT TTTCGACGGC ATTTCGCGAG
TACTTCAACT GCACGCCGTC CGCCTGCCGC CAGGCCGGCG TGGGCCGCCG CGCCCCCGAC
GCGTGA
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| Protein sequence | MSYWSPPEPR RVRLLVVDEG VDEGVDELKP LLETLRCAGY GITHAFGAME GYRRATALQM
DLVLLDVGPG STDGFAACRL LKADPATADI PVIFLTSSAS LEERLTGLRA GAVDYIVKPF
DPAEVMARVE IHLALAESRR SRIAPATRSA SPTDRPATND DGAPGSDVDR MLMQAAERLI
LADLSHVLPL RELAARVGTH EKRLSRVFKE LANRTVFEFV REARLHEAHR LLLESAMRIE
EIAAAVGFSS AANFSTAFRE YFNCTPSACR QAGVGRRAPD A
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