| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4594 |
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| Symbol | |
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| ID | 7973292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4867929 |
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| End bp | 4870052 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644795178 |
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| Product | protein of unknown function DUF262 |
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| Protein accession | YP_002946465 |
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| Protein GI | 239817555 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1479] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCA CCGAAGCGAA CCTGCTGAAA TTCCTGAAAA AGTCTCCGCA GTTCGTCATC
CCGATCTACC AGCGCAACTA CTCGTGGACG GCCGCCCAGT GTCGGCAGCT TTGGGCTGAT
CTGATGAGAG CCGGTAGGGA TGACAAGGTC AACGCGCACT TCATTGGCTC CATCGTCTAC
GTCGAGCGTG GTCTCTCGTC GGTCACGAGC CAGGAGGCAT TGTTGGTCAT CGACGGGCAG
CAGCGACTGA CCACCAGCAC ATTGCTCATC GCCGCACTGG CGAAGCACTT CGAGTCGCAA
GGGTTGGGGG AGCTTCTGGA AGCCTTCTCC AGCAAAAAAC TCCGCAACTA CTTCCTGCTG
AACCCGGATG AAGAAGGAGA GCGGCACTTC AAGCTGATCT TGTCTGAAAC AGACAAGGAA
ACCTTGCTGG CCATCTTGCA GAACGCCCCC CTTCCTTTGG AGGCCAGCAG CCGCATCAGC
GAGAACTACG CCCTCTTCCA GGAGTTGGTC GCTTTGCACC AAGGCGAACT GCCCGCTATC
TGCCAAGGCT TGGCCAAGCT TGTCATTGTT GACGTGTCGC TGGACCGCGC ACATGACAAC
CCTCAGTTGA TTTTTGAAAG CATGAATTCC ACCGGCCTTG AACTCAGTCA GGCCGACCTC
ATTCGTAACT ACATCCTGAT GGGGCTGGAG CCGAAACTTC AGACGGAGCT TTACAAGACC
CACTGGCGAC CGATGGAGCG GGCCTTTGGG CAGGCAGCGT ATGTAGTGCA CTTCGACGCC
TTCATGCGCC ATTACCTGAC AGCCAAAACG GGAGAGATTC CGAACGTGCG CGAGGTCTAC
GTCGCGTTCA AGGCATTTGC ACGCAGCCTC AAAGGTGACA CCCGAGACCT GGTGTCTGAC
ATCCATGCCT ATGCCTCCTA CTACTGCGCG ATGGCATTGA ACACGGAGCC CGAAGGCGCG
CTGAAGCAGG CCTTCCATGA TTTGCGCGAG CTGAAGGTAG ACGTCGCCTA TCCCTTCCTG
TTGGACGTGT ACCACGACTA CCAGCAAGGT CGTCTCAGTA GCGATGAGGT GCTGCAAATC
GTCCGCTTGG TGGAAAGCTA TGTGTTTCGC CGCGCGATCT GCGCCATTCC CACCAACTCG
CTGAACAAGA CCTTCGCTGG CATGGGCCGC ACGCTCAAGA AGGACCGCTA CTTGGAGAGC
GTGCAAGCCG CGTTCCTCAT GCTGCCATCC TACCGCCGCT TCCCATCCGA CGACGAGTTT
CAGCGCGATG TGAAGGTGCG TGACCTCTAT AACTTTCGCA GCCGTGGCTA TTGGCTGCGC
CGCCTGGAGA ATCACGGGCG AAAAGAGCGG GTTGTGGTGG AGGACTACAC CATCGAGCAC
ATCCTGCCGC AGAACGAGGC CCTATCTAAG GAGTGGCAGG CCGAACTGGG ACCTGATTGG
CAGCGCGTTC AGCAGGACTG GCTCCACACG CTGGGCAACT TGACGCTGAC TGGCTACAAC
AGCGAATACA GTGACCATCC CTTTGCCTAC AAGCGCGACC AAGTTACCGA CAAGGATGGC
CATCCGGTGG GCTTCTCCCA CAGCCCGTTG AAGCTGAATT TCGGCCTTGG CAGGGTTACC
TCCTGGGATG AGGCCGCCAT CAAGACCAGG GCTGATCGCC TGGCTGCAGA CGCGGCGAAG
GTTTGGGTCG CCCCCCAGCT GCTTGCCGAC GTGCTGGAGG CCTACCGGCC GAGTTCTTCT
AAGCAGGGTC AGCAATACAG CATGACGGAC CATACCAACT TGGCCATCGG ACCCATGCGA
GACTTGTTCC TGGCCTTGCG CAAAGCGGTG CTGTCACTGG ATCCTTGCGT GAGCGAAGAG
TTCTTGAAGC TCTATGTCGC CTACAAGGCC GAGACGAACT TTGTCGATAT CGTGCCACAG
ACCAGGCGTC TGTTGCTGGT GCTCAATCTT GGCATAGCCG ACATTGAAGA CCCCAAGGGC
TTGTGCCGCG ACATTTCCAA CATTGGCAGA TGGGGCAATG GCGATGTCGA GGTGGGACTA
AGCACCTTGG AAGACCTACC CTACGTGATT GGCCTCATTA GGCAGTCCTT TGACCACCAA
ATGGGCGGGC CGCAAGACGC GTGA
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| Protein sequence | MKATEANLLK FLKKSPQFVI PIYQRNYSWT AAQCRQLWAD LMRAGRDDKV NAHFIGSIVY
VERGLSSVTS QEALLVIDGQ QRLTTSTLLI AALAKHFESQ GLGELLEAFS SKKLRNYFLL
NPDEEGERHF KLILSETDKE TLLAILQNAP LPLEASSRIS ENYALFQELV ALHQGELPAI
CQGLAKLVIV DVSLDRAHDN PQLIFESMNS TGLELSQADL IRNYILMGLE PKLQTELYKT
HWRPMERAFG QAAYVVHFDA FMRHYLTAKT GEIPNVREVY VAFKAFARSL KGDTRDLVSD
IHAYASYYCA MALNTEPEGA LKQAFHDLRE LKVDVAYPFL LDVYHDYQQG RLSSDEVLQI
VRLVESYVFR RAICAIPTNS LNKTFAGMGR TLKKDRYLES VQAAFLMLPS YRRFPSDDEF
QRDVKVRDLY NFRSRGYWLR RLENHGRKER VVVEDYTIEH ILPQNEALSK EWQAELGPDW
QRVQQDWLHT LGNLTLTGYN SEYSDHPFAY KRDQVTDKDG HPVGFSHSPL KLNFGLGRVT
SWDEAAIKTR ADRLAADAAK VWVAPQLLAD VLEAYRPSSS KQGQQYSMTD HTNLAIGPMR
DLFLALRKAV LSLDPCVSEE FLKLYVAYKA ETNFVDIVPQ TRRLLLVLNL GIADIEDPKG
LCRDISNIGR WGNGDVEVGL STLEDLPYVI GLIRQSFDHQ MGGPQDA
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