| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4576 |
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| Symbol | |
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| ID | 7973274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4834272 |
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| End bp | 4835873 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795161 |
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| Product | AAA ATPase |
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| Protein accession | YP_002946448 |
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| Protein GI | 239817538 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3972] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGAT TGCTTGCGGG AGTCTTGCCC GACGCTTGCA CGATCTACCA CAGCCTCCAA
ATCTCGTATC TGCATGAGTC GACCCAGCGC TTCGGCGAGC TCGATGTCGT CGTCGCCTTT
CCGGGAGGGC ATCTTGCCGT TCTGGAGGTC AAGGCTGGCC AGGTCGAGCT CTCTGATCGC
GGTATCTTCA AGCGCTATGG AGCTTCGGAG AAGAACCTCG CGCACCAGGC TCACGCGCAA
TTGCAGGGTC TGATCGGACG CTTGCGTGAT TCGCACTTGG GTGAGGTTCG GATCGCTCAC
TTCCTGCTGT TGCCTGACTT CCATGTCGCC CAAGGCAGCA TCGGCTATCC GCGTGATCGC
ATCATCGATG CGAGCCAGCT GGATCACATG GGCGCCTTGT TGACGGCAGC ATGCCGCCAT
ACGCCTCTCG AGCAGGAGGC GACCCAGCGG CTTCATGACT TCCTCGCCAA TCGCTTTGCT
GTGGTGCCGG ATGCAGCTTT TCGCCAGGGA CAGAGACAGT CTGCGACACG TCGTCTGTCC
GAGGGCCTCG CGACCTGGGT GCCGCGCATC ACTTCGCCGG GAGGTGTGTA TGTGGTCGAA
GCAACGGCAG GTTCGGGCAA GACTCAGCTT GCGCTGGCGC TCCTGCAGGA CGCCGACCGG
CAGCGGCAGC GAGCGCGCTA CGTTTGCTTC AACAGACCCT TGGCTGATCA CATCGCGAAG
TTGGCGCCGG TGCGCACTGC GGTCGGTACG GCTGACGAAC TCGGCATTGC GGCGTTGCGG
GCGACCGGGG AGTCGCCGGA CTTCCGCAAC GATGGCACTG TGTTCCGTCG AGGACTTGAG
GCGCTGCGTG CCGCAAGTGG CGACGTCGAG CCAAACCTGG ACCTGCTGGT CATCGATGAG
TCGCAGGACT TCGATCACGA CTGGCTCGAA ACCTTGTTGC CTCGGCTCAA GCCGGAGGGC
CGACTCTATG TGATGGGCGA CACAAACCAA GCCATCTATC GCAAGGATGC TTTCGATTTG
CCTGATGCTA CGCGCATCGT GTGCTCCGAC AACTTCCGCA GCCCGCGGCA GATCGTCGAC
ACCCTCAATC TGCTGCGCCT GAGCGCGCAA CCGGTGGTGG CCAAAGGGCC CGAAGCCGGC
GAGATGCCGT CCACGTACGT TTATGAACTT TCCGACGCGG GAGGCCTGCA CGCTACCGAA
CAGGTCGTCG CTGGGTTGTT GCGCGAAGGC CATGTGCTCG AAGACATCGC ACTCGTGAGC
TTCTGCGGAC GCCAGCGTTC GCAATTGCTG AAGCAGGAGC GGCTCGGTCC TTGGCCGCTT
CGCCGCTTCA CAGGTGAGTT CGACGAAGCG GACACTCCCG TCTGGACGAC CGGCGAATTG
CTGGCCGAAT CTGTCTACCG ATTCAAAGGC CAGTCCGCGC CCGTCGTGGT GGTGTGCGAG
ATGGATTTCG ACGAGCTCGA CGACCAGCGC GCGCGCATGC TGTTCGTTGC CATGACGCGC
GCGCAGGCCC ACTTGCACCT CGTGATGTCC GGCGCCGCGG AAAGGGCCCT GTTGGCTCGC
GCGCTCGACG ATGCCTCGCC GGCCGTTGGC GCCAATCCTT GA
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| Protein sequence | MLRLLAGVLP DACTIYHSLQ ISYLHESTQR FGELDVVVAF PGGHLAVLEV KAGQVELSDR
GIFKRYGASE KNLAHQAHAQ LQGLIGRLRD SHLGEVRIAH FLLLPDFHVA QGSIGYPRDR
IIDASQLDHM GALLTAACRH TPLEQEATQR LHDFLANRFA VVPDAAFRQG QRQSATRRLS
EGLATWVPRI TSPGGVYVVE ATAGSGKTQL ALALLQDADR QRQRARYVCF NRPLADHIAK
LAPVRTAVGT ADELGIAALR ATGESPDFRN DGTVFRRGLE ALRAASGDVE PNLDLLVIDE
SQDFDHDWLE TLLPRLKPEG RLYVMGDTNQ AIYRKDAFDL PDATRIVCSD NFRSPRQIVD
TLNLLRLSAQ PVVAKGPEAG EMPSTYVYEL SDAGGLHATE QVVAGLLREG HVLEDIALVS
FCGRQRSQLL KQERLGPWPL RRFTGEFDEA DTPVWTTGEL LAESVYRFKG QSAPVVVVCE
MDFDELDDQR ARMLFVAMTR AQAHLHLVMS GAAERALLAR ALDDASPAVG ANP
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