| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4562 |
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| Symbol | |
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| ID | 7973260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4813756 |
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| End bp | 4814277 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795147 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002946434 |
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| Protein GI | 239817524 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCG AGGTGTCTGG CGGCGAACTG GCCAAGACCT CGGGGATTTC TGCCTCGATG
CTTTCGCGCA TCGAGCGCGG GCTGGTCTCG CCTTCGGTGG AGACCCTGGA GCGTCTCGCG
AATGGTTTGG GGGTGCCGAC GTCGCGGTTC TTCGGGGACC AGGCGCGGCG CACGGACTTC
TGCCATGTGC GCGCAGGACA TGGTGTCCTG GTCGATCGGA TCGGCGCGGT GGCGGACTAT
CGCTACGAAC TGCTGGGCCA CCTGCTATCG GGCAACCTGT TCGTGGAGCC CTACCTGGTC
ACGCTGTTGC CCGGCGCCGA TCCCTATGTG ACCTTCCAGC ACCCCGGCCT CAAGTTCCTG
TACTTCCTGT CCGGGGAGGT CCGCTACCGT TACGGCGGCA GGACTGCGGA GGTGAGGGCA
GGGGACTCGC TGCTGTTCGA TGCGACGGCG CTGCATGGGA TCGAGGCTAT TCAGACGCAG
CCCGTCTCTT ACCTGTCGGT GGTGTTCACG CTGCGAGAGT AG
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| Protein sequence | MAAEVSGGEL AKTSGISASM LSRIERGLVS PSVETLERLA NGLGVPTSRF FGDQARRTDF
CHVRAGHGVL VDRIGAVADY RYELLGHLLS GNLFVEPYLV TLLPGADPYV TFQHPGLKFL
YFLSGEVRYR YGGRTAEVRA GDSLLFDATA LHGIEAIQTQ PVSYLSVVFT LRE
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