| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4491 |
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| Symbol | |
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| ID | 7972779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4739545 |
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| End bp | 4741074 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795080 |
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| Product | protein of unknown function DUF112 transmembrane |
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| Protein accession | YP_002946368 |
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| Protein GI | 239817458 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAA TCAGTGCCCT GATGCAGGGC TTCTCGGTAA TCCTCACGCC GATGAACATC
GGCCTGATGT TCGTCGGCAT CATCCTGGGC GTGCTGATCG GCGTGCTCCC GGGCCTGGGC
GGCGCCAACG GGGTGGCGAT CCTGCTGCCC CTCACGTTCA CGATGTCGCC GACCTCGGCA
ATCATCATGC TGTCGTGCAT CTACTGGGGT GCGCTGTTCG GCGGGGCCAT CACCTCCATC
CTGTTCAACA TCCCGGGCGA GCCGTGGTCG GTGGCCACCA CCTTCGACGG CTATCCGATG
GCGCAGCAGG GCAATGCGGG CGCCGCGCTG ACTACCGCCT TCACCTCGTC GTTCGTGGGC
GCGCTGCTGG CGGTGATCAT GATCACCTTC CTGGCGCCGC TGGTGGCCAA GTTCGCGCTC
AAGTTCGGCT CGCCCGAATT CTTTGCGGTG TACCTGCTGA CCTTCTGCAG CTTCGTGGGC
ATGGGCAAGG GCTCGCCGTT CAAGATCCTG GCGTCGATGG CGCTCGGCTT CGCGCTGGCC
AGCGTGGGCA TGGACACCGT CACGGGCCAG CTGCGGCTCA CCTTCGGCCA GCCCGAGCTG
ATGCGCGGCT TCGACTTCCT GATTGCGGTG ATCGGCCTGT TCGGCATCGG CGAGATCCTG
CTGTCGATGG AAGAGGGCCT GAAGTTCTCG GGCAAGAGCG CGAAGATCGA TCCCAAGGTG
GTGCTGCAGA CCTGGAAGCA GCTGCCGCAG TACTGGGTGA CTTCGCTGCG CAGTTCGCTG
ATCGGCATCT GGATGGGCAT CACGCCCGGC GGCGCGACAC CGGCTTCGTT CATGGCCTAT
GGCCTGGCCA AGAAGATGTC CAAGCGCGGC TCCAAGTTCG GCACCGGCCA GATGGAAGGC
GTGGTGGCCC CCGAGACCGC AGCGCACGCC GCGGGCACCA GCGCGCTGCT GCCGATGCTG
GCGCTCGGCA TTCCGGGTTC GCCCACCGCC GCGGTGCTGC TGGGCGGCCT GCTGATCTGG
GGCCTGCAGC CCGGCCCGCT GCTGTTTGTC GAGCAGAAGG ACTTCGTCTG GGGCCTGATC
GCCAGCATGT ACCTGGGCAA CATCGTGGGC CTGATCGTGG TGCTGAGCAC GGTGCCGCTG
TTCGCCTCGA TCCTGCGCAT TCCGTTCTCG ATCATTGCGC CGGTGATCAT CGTGATCTGC
GCCATTGGCG CCTACACGGT GCACAACGCG ATGCTCGACA TCTGGTTCAT GCTCGGCTTC
GGCGTGGTGG GCTACCTGTT CAAGAAGCTC GACTTCCCGC TGGCGCCGCT GGTGCTGGCG
CTGGTGCTCG GCGACAAGGC GGAAGACTCG TTCCGCCAGG CCATGCTGGT CTCGCAGGGC
GACGTGACGA TCATGTTCTC GAACCCGCTG GTCGGCGGCA TCACCACCCT GGCGCTCGTG
CTGCTGTTCT GGCCGCTCAT TTCCAAGGCG CTGGCTTTTA TCAAGCCCAA GAAGCCCGAC
GAGTTCGCCG TCGAGCGCCC GGTGGACTGA
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| Protein sequence | MDEISALMQG FSVILTPMNI GLMFVGIILG VLIGVLPGLG GANGVAILLP LTFTMSPTSA
IIMLSCIYWG ALFGGAITSI LFNIPGEPWS VATTFDGYPM AQQGNAGAAL TTAFTSSFVG
ALLAVIMITF LAPLVAKFAL KFGSPEFFAV YLLTFCSFVG MGKGSPFKIL ASMALGFALA
SVGMDTVTGQ LRLTFGQPEL MRGFDFLIAV IGLFGIGEIL LSMEEGLKFS GKSAKIDPKV
VLQTWKQLPQ YWVTSLRSSL IGIWMGITPG GATPASFMAY GLAKKMSKRG SKFGTGQMEG
VVAPETAAHA AGTSALLPML ALGIPGSPTA AVLLGGLLIW GLQPGPLLFV EQKDFVWGLI
ASMYLGNIVG LIVVLSTVPL FASILRIPFS IIAPVIIVIC AIGAYTVHNA MLDIWFMLGF
GVVGYLFKKL DFPLAPLVLA LVLGDKAEDS FRQAMLVSQG DVTIMFSNPL VGGITTLALV
LLFWPLISKA LAFIKPKKPD EFAVERPVD
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