| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4482 |
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| Symbol | |
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| ID | 7972770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4731311 |
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| End bp | 4732480 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795071 |
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| Product | succinyl-CoA synthetase, beta subunit |
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| Protein accession | YP_002946359 |
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| Protein GI | 239817449 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCC ACGAATACCA GGGCAAGGAC GTATTGCGCA AATACGGCGT TCCCACGCCG
CGTGGATATG CCTGCTTTTC GCCCGACGAG GCGGCCGATG CGGCCGCGCA GCTTGGCGGC
AGGGCCTGGG TGGTCAAGGC GCAGATCCAT GCGGGCGGCC GCGGCAAGGG CGGCGGCGTG
CGGCTGGCCT GGTCGGCGGC CGAAGTGCGG CGCCATGCCG ACGAGCTGCT TGGCATGACC
CTGCGAACGC ACCAGACGGG CCCGCAAGGC CGGCTCGTGA AGCGGCTGCT GGTGGAGGAG
AGCGTCGAGA TCGAAAAGGA GTTCTACCTC GGCATGGCGG TCGACCGCGA ATCGCGCCGC
GTGGCCCTGA TGGCGTCGAG CGAAGGCGGC ATGGACATCG AGGACGTGGC GGCGCGCACG
CCGGAAAAAA TCCGCAAGCT CTTCGTCGAT CCGTCCACCG GCGTGAAGGC AGTCGAGGCC
GATGGCCTGG CGCGCGACAT CGGCTTTTCC GGAAAGCTGC TGCCGCAGGT GCGCACGCTG
GTGCAGAACC TCTACCAGGC CTTCGACGCC TGCGACGCAT CGCTGGCCGA GATCAACCCG
CTGGCGCTCA CGCGCGACGG CCGCGTGCTG GCGCTGGATG CCAAGTTCAA CTTCGATCCG
AACGCGCTGT TCCGCCAGCC CGAGATCGCC GCGATGCGCG ATCTCGACGA GGAAGACCCG
GCCGAGGTCG AGGCCTCGAA GTTCGATCTT TCCTACATTG CACTGGAAGG CGACATCGGC
TGCCTGGTGA ACGGCGCGGG CCTGGCGATG GCCACGATGG ACGCGATCAA GCTCTACGGC
GGATCGCCGG CCAATTTCCT GGACGTGGGC GGTGGCGCCA CGGCCGAGAA GGTGACCGAA
GCCTTCAAGC TGATGCTGCG CAACCCGAAC CTGCGCGCGA TCCTGGTCAA CATCTTCGGC
GGCATCATGA AGTGCGACGT GATCGCGCGC GGCGTGGTGG CTGCCGCGCG CGAGGTCCAG
CTGGCGGTGC CGCTGGTGGT GCGCATGAAG GGCACCAACG AGAGCCTGGG CAAGACCATC
CTCGGGCAGT CGGGCCTTCG GATCATCAGT GCGGACGACA TGGCGGAGGC GGCGGGGCTG
GTGGTGGCTG CTGCGCGGCG GGGAGGCTAG
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| Protein sequence | MNIHEYQGKD VLRKYGVPTP RGYACFSPDE AADAAAQLGG RAWVVKAQIH AGGRGKGGGV
RLAWSAAEVR RHADELLGMT LRTHQTGPQG RLVKRLLVEE SVEIEKEFYL GMAVDRESRR
VALMASSEGG MDIEDVAART PEKIRKLFVD PSTGVKAVEA DGLARDIGFS GKLLPQVRTL
VQNLYQAFDA CDASLAEINP LALTRDGRVL ALDAKFNFDP NALFRQPEIA AMRDLDEEDP
AEVEASKFDL SYIALEGDIG CLVNGAGLAM ATMDAIKLYG GSPANFLDVG GGATAEKVTE
AFKLMLRNPN LRAILVNIFG GIMKCDVIAR GVVAAAREVQ LAVPLVVRMK GTNESLGKTI
LGQSGLRIIS ADDMAEAAGL VVAAARRGG
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