Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4469 |
Symbol | |
ID | 7972757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4714772 |
End bp | 4715959 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644795058 |
Product | hypothetical protein |
Protein accession | YP_002946346 |
Protein GI | 239817436 |
COG category | [S] Function unknown |
COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.209689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCG ATTTCTTCTA CACGCTGCGC TCGGCCAAGC TGCCGGTCTC GGTCAAGGAA TACCTCACGC TGCTCGAGGC GCTGCAGGCC GACGTGGTGG GCCCCAACTC CGACGGCGCC TTCGGCCTGG ACGACTTCTA CTATCTCTCG CGCACCGCGC TTGTCAAGGA CGAGAAGCAC TACGACAAGT TCGACCGCGC CTTTGCCGCC TACTTCAAGG GCGTGGAGAT GCTGGCCGAC TTCACCAAGG AAGTGCCGCT CGACTGGCTG CGCAAGACAC TGGAGCGCGA GTTCACGGCC GAGGAAAAGG CCAAGATCGA GAAGATGGGC TGGGACGAGC TCATGGAAAC GCTCAAGAAG CGCTTCGAGG AACAGAAGGA GCGCCACGAG GGCGGCAACA AGTGGATCGG CACCGGCGGC ACCTCGCCCT TCGGCCACGG CGGCTACAAC CCGCAGGGCG TGCGCATCGG CGGCGCGGGC AAGAACAAGA GCGCCGTGAA GGTGTGGGAC CAGCGCGCCT ATAAAGACTA CGACGACAGC CAGGAACTCG GCACGCGCAA CATCAAGGTG GCGCTGCGGC GGCTGCGCAA GTTCGCGCGC GAGGGCCACG AGGAAGAGCT GGACCTGGAC GACACCATCC ACTCGACCGC GGCCAATGCC GGCTACCTCG ACATCAAGAT GCGGCCCGAG CGCCACAACA ACGTCAAGGT GCTGCTGCTG ATGGACGTGG GCGGCACCAT GGACGAGCAC ATCCAGCGCG TGGAAGAGCT GTTCTCGGCC GTCAAGACCG AGTTCAAGCA CCTGGAGTTC TTCTACTTCC ACAACTGCGT CTACGACTTC ATGTGGAAGA ACAACAAGCG CCGCTTCTCC GAGAAGTTCG CGACCTGGGA CATCCTGCGC AAGTACAACA AGGACTACAA GCTCATCTTC GTCGGCGACG CGACCATGAG CCCCTACGAG ATCCTGCAGC CCGGCGGCAG CGTCGAATAC AACAACGAGG AAGCCGGCGC CGAATGGATC CAGCGCCTCA CGCACACCTT CCCCAAGTTC GCCTGGATCA ACCCCGAGCC GCAGGGCGTG TGGCAGTACC GCCAGAGCAT CGCGGTGATG CAGCAGCTCA TGTCCAACCG CATGTATCCG CTCACGCTGC GCGGCCTCGA AGAAGCAATG CGAATGCTTT CTAAGTAA
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Protein sequence | MLIDFFYTLR SAKLPVSVKE YLTLLEALQA DVVGPNSDGA FGLDDFYYLS RTALVKDEKH YDKFDRAFAA YFKGVEMLAD FTKEVPLDWL RKTLEREFTA EEKAKIEKMG WDELMETLKK RFEEQKERHE GGNKWIGTGG TSPFGHGGYN PQGVRIGGAG KNKSAVKVWD QRAYKDYDDS QELGTRNIKV ALRRLRKFAR EGHEEELDLD DTIHSTAANA GYLDIKMRPE RHNNVKVLLL MDVGGTMDEH IQRVEELFSA VKTEFKHLEF FYFHNCVYDF MWKNNKRRFS EKFATWDILR KYNKDYKLIF VGDATMSPYE ILQPGGSVEY NNEEAGAEWI QRLTHTFPKF AWINPEPQGV WQYRQSIAVM QQLMSNRMYP LTLRGLEEAM RMLSK
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