| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4433 |
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| Symbol | |
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| ID | 7974107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4673330 |
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| End bp | 4674535 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795022 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_002946310 |
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| Protein GI | 239817400 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.874568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC AAGCCTTCAT CTGCGACGCC GTTCGCACCC CCTTCGGCCG CTACGGCGGT
TCGCTCAGCA GCGTGCGCAC CGACGACCTG GGCGCGGTGC CGCTCAAGGC GCTGATGGAA
CGCAACAAGA ACGTCGACTG GCAGGCCGTG AGCGACGTGC TCTACGGCTG CGCCAACCAG
GCCGGCGAAG ACAACCGCAA CGTCGCGCGC ATGTCGGCGC TGCTCGCGGG CCTGCCGCTC
GAAATCGGCG GCGGCACCAT CAACCGCCTG TGCGGCTCGG GCCTCGATGC GCTGGGCACC
GCGGCGCGCG CCATCCGCGC CGGTGAAGCC GGCCTCATGA TTGCCGGCGG CGTCGAAAGC
ATGAGCCGCG CGCCCTTCGT CATGCCCAAG GCCGAGAGCG CCTTCAGCCG CAACAACGCG
GTGTACGACA CCACCATCGG CTGGCGCTTC GTCAACAAGC TCATGAAGGC GCAGTACGGC
GTCGACTCCA TGCCCGAGAC GGCCGAGAAC GTGGCCACCG ACTACAAGAT CGAGCGCGAG
GCGCAGGACC TGATGGCGCT CAACTCGCAG CTGCGCGCGG TGGCCTCGCA GAAGTCCGGT
TTCTTCGACG CCGAGATCGT GCCCGTGACC GTGCCGCAGA AAAAGGGCGA CGCGATCATC
GTCAACAAGG ACGAGCATCC GCGCGAAACC AGCCTCGAAT CGCTGGCCAA GCTCAAGGGC
GTGGTGCGCC CCGACGGCAC CGTGACGGCT GGCAACGCCA GCGGCGTGAA CGACGGCGCT
TGCGCGCTGC TGCTGGCCGA CGAAGCCAGC GCCGCCAAGC ACGGCCTCAC GCCGCGCGCC
CGCGTGGTCG GCATGGCCAC CGCCGGCGTG GCGCCGCGCG TGATGGGCAT CGGCCCGGCG
CCCGCCACGC AGAAGGTGCT GGCGCTCACC GGCCTCACGC TCGACCAGCT CGACGTGATC
GAGCTCAACG AAGCCTTCGC GGCGCAAGGC CTTGCCGTGC TGCGCCTGCT GGGCCTGCAG
GACAACGACC CGCGCGTCAA CATCAACGGC GGCGCCATTG CGCTCGGCCA CCCGCTGGGT
GCCAGCGGTG CGCGCCTGGC CACCACCGCG GTCAACCAGC TGCACAAGGG CGGCGGCCGC
TATGCGCTGT GCACCATGTG CATCGGTGTG GGCCAGGGCA TTGCCGTGAT CCTGGAACGC
GTCTGA
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| Protein sequence | MTNQAFICDA VRTPFGRYGG SLSSVRTDDL GAVPLKALME RNKNVDWQAV SDVLYGCANQ
AGEDNRNVAR MSALLAGLPL EIGGGTINRL CGSGLDALGT AARAIRAGEA GLMIAGGVES
MSRAPFVMPK AESAFSRNNA VYDTTIGWRF VNKLMKAQYG VDSMPETAEN VATDYKIERE
AQDLMALNSQ LRAVASQKSG FFDAEIVPVT VPQKKGDAII VNKDEHPRET SLESLAKLKG
VVRPDGTVTA GNASGVNDGA CALLLADEAS AAKHGLTPRA RVVGMATAGV APRVMGIGPA
PATQKVLALT GLTLDQLDVI ELNEAFAAQG LAVLRLLGLQ DNDPRVNING GAIALGHPLG
ASGARLATTA VNQLHKGGGR YALCTMCIGV GQGIAVILER V
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