| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4429 |
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| Symbol | |
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| ID | 7974103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4670782 |
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| End bp | 4671525 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795018 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002946306 |
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| Protein GI | 239817396 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.23129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCAA AGACCTCCGA CCACATCCTC ATCGTCGACG ACGACCGGGA AATCCGCGAA
CTGCTCACCA CCTACCTGGT GAAGAACGGC TTGCGCGTGG TCGCGGTGCC CACCGGCCGC
CACATGCGCG CCGCGCTCGA GGAGTCGGGT CCGTTCGACC TGATCATCCT CGACCTGATG
CTGCCCGGCG AAGACGGGCT CACGCTCTGC CGCGACCTGC GCACCGGCAA GTACAAGGCC
ACGCCCATCC TGATGCTGAC CGCGCGCAGC GAGGAGGCCG ACCGCATCCT GGGCCTGGAG
ATGGGCGCCG ACGATTACCT GGCCAAGCCT TTTTCCGCAC GCGAGCTGCT CGCGCGCCTG
CGCGCCGTGA TGCGGCGCAC GCGCATGCTG CCGCCGAACA TGGGCGCGGT CGAACCCTCG
CAGAAACTGA GCTTCGGCGA ATGGCAGGTC GACACGGTGG CGCGCCACCT GATCGACGAC
AGCGGCGTCA TGGTGGCGCT GAGCGGTGCC GAATACCGGC TGCTGCGCGT GTTCCTCGAC
CATCCGCAGA AGGTGCTGAG CCGCGACCAG TTGCTCAGCC TCACCCAGGG CCGCGAAGCC
GAGCTCTTCG AGCGCTCGAT CGACCTGCTC GTGAGCCGGC TGCGCCAGCG CCTGCGCGAC
GACGCACGCG AGCCCCGCTA CATCAAGACC GTGCGCAGCG AAGGCTATGT GCTCGCTTCG
GCCGTCGAAG CCATGGACGA CTGA
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| Protein sequence | MTPKTSDHIL IVDDDREIRE LLTTYLVKNG LRVVAVPTGR HMRAALEESG PFDLIILDLM
LPGEDGLTLC RDLRTGKYKA TPILMLTARS EEADRILGLE MGADDYLAKP FSARELLARL
RAVMRRTRML PPNMGAVEPS QKLSFGEWQV DTVARHLIDD SGVMVALSGA EYRLLRVFLD
HPQKVLSRDQ LLSLTQGREA ELFERSIDLL VSRLRQRLRD DAREPRYIKT VRSEGYVLAS
AVEAMDD
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