Gene Vapar_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4426 
Symbol 
ID7974100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4666936 
End bp4668726 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content71% 
IMG OID644795015 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002946303 
Protein GI239817393 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATCC TCTTCATTGC CTACATGGGC GGGGTGCTCA CCATCCTGAG CCCCTGCATC 
CTGCCGGTGC TGCCTTTCGT GTTCGCCCGC GCCGACCGTC CGTTCCGCTC GCACGGCCTG
CCGATGCTGA TGGGCATGGC GCTGGCCTTT GCCGCCGTGG CCACGCTGGC GGCGGTGGGC
GGCGGCTGGA TCGTCACGCT CAACGAATAT GGGCGCCATG GCGCCATCGC CCTGCTCGCG
CTGTTCGGCC TGACTTTGCT GTTCCCCGGC GTGGCCGAGC GCCTGAGCCG GCCGCTGGTG
GCGCTGGGCC TCCGCATGTC CGAGCCGCGC GGCAGCGATG GCGCGGCGCC TGCATCCGGG
TTCTCGCCGC TGCTGCTGGG CGTGGGCACC GGCCTGCTCT GGGCGCCGTG CGCGGGGCCG
ATCCTCGGCC TGATCCTGAC GGGCGCGGCG CTCAATGGCG CGAGCGTCGG CACCTCGCTG
CTGCTGCTGG CCTATGCGGC CGGCGCCTGC ACCTCGCTCG CGGCCGCGCT GCTGTTCGGC
GGGCGGCTTC TCTCCGTCAT GAAGCGTTCG CTGCATACCG GCGAATGGGT GCGGCGCGCG
GCCGGCGCGG CCGTGCTGGT GGGCGTGGGC GCCATTGCGC TCGGGCTGGA CACCGGCTTG
CTCGCCCGCC TGTCGGTGGG CACTACGTCG GCGCTGGAGC AGGCGCTGGT GGACAGGATC
AAGCCGGGCA AGCCGCAGGC GGAACCGGTC GCGGCGCGCG AAGACGCGGG CCTCCTGCGC
GTGTCGGACA ACCGCACGGC CCCGCCGCCC GCGCGCGAGC TCAGGGTCGA AGGCCGCTTT
CCTTCACTGG CCGGCGCCAC CGAATGGATC AACTCTGCGC CGCTCGCGCC CGAGGCCCTG
CGCGGCAAGG TGGTGCTGGT CGACTTCTGG ACCTACTCGT GCATCAATTG CCTGCGCACG
CTGCCCTACC TTCGTGCATG GGCCGAGAAG TACAAGGACG CGGGGCTGGT GGTCATCGGC
GTGCATTCGC CGGAGTTCGC GTTCGAGAAG CAGCCGGCCA ACGTGCGCAA GGCCGTCCAG
GACCTGGACA TCGGCTTTCC GGTGGCGCTG GACAACGACT TCGCGATCTG GCGCGGCTTC
GACAACCAGG CCTGGCCCGC GTTCTATTTC ATCGATGCCG AGGGCCGCAT CCGCCACCAC
CAGTTCGGCG AGAACCGCTA CGACAAGGCC GAGCAGGTCA TCCAGCAGCT GCTGGCCGAG
GCGGGCCAGA CCCGCATCGC CGCCGGGCTG GTGGCGCCGC TCGGGCAGGG TACCCAGGCC
GCGCCCGGCG CCGAGCCGCC GCTCTCCGGC GAAACCTACC TGGGCCACGA GCGTGCGCAC
GGCTTTGCCT CGCCCGGGGG CATCGTGGGG GACCATGCGA AGGCCTACCA GCCCGCGGCC
TCGGCGCTGC GCACCAACCA GTGGTCGCTG GCCGGCGACT GGACGGTGGA GGCCGAGCGC
GCCGTGCTGA ACAGCGCCAA TGGCCGCATC GCCTACCGCT TCCAGGCGCG CGACCTGCAC
CTGGTGCTGG GGCCGGCGGC CAACCGCAAG CCGGTGCGCT TCAGGGTGCT GGTGGATGGA
AAGCCGCCGC TCGCGGACCA CGGTTCCGAC ACCGACGTAC AGGGCTACGG CGTGATCGAT
GCACAGAAGC TGTACCAATT GGTGCGGCAG GCGGAGGGCA GCCGGGAGCG GCTGTTCGAG
ATCGAGTTTC TCGACGCCGG CGCGCAGGCC TACGCGTTCA CTTTCGGTTG A
 
Protein sequence
MLILFIAYMG GVLTILSPCI LPVLPFVFAR ADRPFRSHGL PMLMGMALAF AAVATLAAVG 
GGWIVTLNEY GRHGAIALLA LFGLTLLFPG VAERLSRPLV ALGLRMSEPR GSDGAAPASG
FSPLLLGVGT GLLWAPCAGP ILGLILTGAA LNGASVGTSL LLLAYAAGAC TSLAAALLFG
GRLLSVMKRS LHTGEWVRRA AGAAVLVGVG AIALGLDTGL LARLSVGTTS ALEQALVDRI
KPGKPQAEPV AAREDAGLLR VSDNRTAPPP ARELRVEGRF PSLAGATEWI NSAPLAPEAL
RGKVVLVDFW TYSCINCLRT LPYLRAWAEK YKDAGLVVIG VHSPEFAFEK QPANVRKAVQ
DLDIGFPVAL DNDFAIWRGF DNQAWPAFYF IDAEGRIRHH QFGENRYDKA EQVIQQLLAE
AGQTRIAAGL VAPLGQGTQA APGAEPPLSG ETYLGHERAH GFASPGGIVG DHAKAYQPAA
SALRTNQWSL AGDWTVEAER AVLNSANGRI AYRFQARDLH LVLGPAANRK PVRFRVLVDG
KPPLADHGSD TDVQGYGVID AQKLYQLVRQ AEGSRERLFE IEFLDAGAQA YAFTFG