| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4399 |
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| Symbol | |
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| ID | 7974073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4640674 |
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| End bp | 4641369 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794988 |
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| Product | NAD(P)H dehydrogenase (quinone) |
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| Protein accession | YP_002946276 |
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| Protein GI | 239817366 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.259337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAA CAACATCGGC CGCCGGCGAC ACCGGCGGCA TCTACGTGCT CGCGGCCCAT
CCGCACTGGC GCGACTCGCG CGTGAACCGG CGCATGCTGG CCGCCGCGCG CGGCGTGCCG
GGGGTCGATG TCAACGACAT CTACGGCAGC TACCCGGACT TCTCGATCGA TGTCGAGGCC
GAACACGCCC GGCTCGCCAG GGCCAGCCTG GTGGTGCTGC TGCACCCGAT CCAGTGGTAT
TCGATGCCGG CGCTGCAAAA ACTCTGGCTC GACGACGTGC TCAGCTACGG ATGGGCCTAC
GGCCCAGGCG GCACGGCCCT GCAGGGCAAG GACTGCTGGC TGGTCGCCAC CACGGGAAGC
CCCGAGGCGA GCTACCACCC CCAGAGCTAC CACCGCTATT TCTTCGACGC CTTCCTGCCG
CCCTACGAGC AGACCGCGGC GCTGTGCGGC ATGCGCTTCC TTCCGCCGCT GGTCTTGCAC
GGCGCGCGCA GCGCCGCGGA GGACGAGGTG GCGGCACACG TCGAGGTGTT CGCCCAGCGG
CTCGGCAGCT ACCCGCAATG GCCCGAGCTC GAGGAGCTCG ACGCCTGCGT GGCCTGCCCG
GTGCCCGAAA CCGACCGCCC GGCCGAAGCC GATGGCCTGG ACGAGGCGGC GTCCGCCGCC
AACGATGAAC AGAACAACGA AAAAGGCATG GCCTGA
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| Protein sequence | MTTTTSAAGD TGGIYVLAAH PHWRDSRVNR RMLAAARGVP GVDVNDIYGS YPDFSIDVEA
EHARLARASL VVLLHPIQWY SMPALQKLWL DDVLSYGWAY GPGGTALQGK DCWLVATTGS
PEASYHPQSY HRYFFDAFLP PYEQTAALCG MRFLPPLVLH GARSAAEDEV AAHVEVFAQR
LGSYPQWPEL EELDACVACP VPETDRPAEA DGLDEAASAA NDEQNNEKGM A
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