Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4395 |
Symbol | |
ID | 7974069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4638231 |
End bp | 4638947 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644794984 |
Product | ComF family protein |
Protein accession | YP_002946272 |
Protein GI | 239817362 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.136408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGCC GTTGGGCCGA CCGGCCTTTG ACCTCTCTGC TCGCACGGCT GCCCAGCCAG TGCGAGGTGT GCCGCGCCTG GCCCTCGCGC CGCATCTGCG ATGCCTGCGT GGCGCGCTTC GCGCCGCCGG CCGCGCGCTG CGGCAGCTGT GCCCTGCCGG TGCCCGAGGG CGTGGCGCGG TGCAGCGAAT GCATGCGCGA TCCGCCGCCG CTCGATGCCT GCTTCGCAGC CTGCGCCTAT GCGTGGCCCT GGCCCGATTG CATCGCTCAA TTCAAGTTCC ACGGCGAGGC CGGCTGGGCC GGGCCGCTCG CCACGCTGAT GCGCAGCGTG CCGTGGGTGG AGCCGGCGCT GGAGCAATGC GACCGGGTGC TGCCGATGCC GATGGCGCCG GCCCGGCTGC GCGAGCGCGG CTTCAACCAG GCGCTCGAAC TGGCGCGCCG GCTCGCGCCC GCCAAGACCG ACGCGGCGCT GCTGCTGCGT ACCCGCGAGA CGCCGGCGCA GAGCGGCCTC GCGCGCGCCG AGCGCCTTGG CAACCTGCGC GGCGCCTTCG CGGTGGAGCC CTTGCGCGCC CACGAGCTGC AAGGCCGGCG CGTGGTGCTG GTCGACGACG TGATGACCAG CGGCGCCTCG CTGTTCTCGG CCGCCGCGGC GCTGCGGCTG GCGGGCGCGG CGCATGTCAC GGCCCTGGTG TTCGCGCGCA CCGATCCGCC GCATTGA
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Protein sequence | MFSRWADRPL TSLLARLPSQ CEVCRAWPSR RICDACVARF APPAARCGSC ALPVPEGVAR CSECMRDPPP LDACFAACAY AWPWPDCIAQ FKFHGEAGWA GPLATLMRSV PWVEPALEQC DRVLPMPMAP ARLRERGFNQ ALELARRLAP AKTDAALLLR TRETPAQSGL ARAERLGNLR GAFAVEPLRA HELQGRRVVL VDDVMTSGAS LFSAAAALRL AGAAHVTALV FARTDPPH
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