| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4387 |
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| Symbol | |
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| ID | 7974061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4631771 |
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| End bp | 4632652 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794976 |
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| Product | Cytochrome-c oxidase |
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| Protein accession | YP_002946264 |
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| Protein GI | 239817354 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.874568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAA CCACCCACGG CACCACGCCC TACTACTTCG TGCCGGGGCC ATCGGCCTTT
CCGGTCATGG CCGCGACCGG CCTGTTCTTC GTGATTCTCG GCGCGGCCCA ATGGATCAAC
GGCCACCAGT GGGGCGCCTG GTCCCTGCTG GCGGGCATGG TCGCGTGGCT TGCCACGCTG
TTCGTGTGGT TCCGCACCGC CATCGGCGAA AGCGAAAGCG GCCAGTACGG CCACAAGATC
GACCTCTCGT TCCGCTGGAG CATGAGCTGG TTCATCTTCT CCGAAGTGAT GTTCTTCGGT
GCCTTCTTCA CCGCGCTGTG GTGGACCCGC ACCCATTCGC TGCCGGCGCT CGGCAGCCTG
GACAACGCGC TGCTCTGGCC CGACTTCAAG GCCGTGTGGC CCAGCGTTGC AGCCGGCGCC
ACCGGTTCGC CGGCCGACAT CGTCGAGCCC TTCCAGACCG TCGGCCCGTT CTGGCTGCCC
ACGATCAACA CCGCGCTGCT GCTGAGCTCG GGCGTGACGC TCACCATTGC CCACCACGCG
CTGCGTGCCG GCCATCGTGC CCAGACCATC CGCTTCATGT GGCTCACCGT GCTGCTGGGC
GTGCTGTTCC TGGGCGTGCA GGGCTACGAG TACCACCACC TGTACACCGA GCTGAACCTC
AAGCTCAGCT CCGGCGCCTA CGGCTCGACC TTCTTCATGC TGACCGGCTT CCACGGCCTG
CACGTGTTCA TCGGCATGCT GATGCTGCTG TTCATCACGC TGCGCCTGCA GAAGGGCCAC
TTCACGCCGG AGCGCCATTT CGGCTTCGAG GGCGCGGCCT GGTACTGGCA CTTCGTCGAC
GTGGTGTGGC TCGGCCTCTA CATGCTGGTG TACTGGCTTT GA
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| Protein sequence | MSSTTHGTTP YYFVPGPSAF PVMAATGLFF VILGAAQWIN GHQWGAWSLL AGMVAWLATL
FVWFRTAIGE SESGQYGHKI DLSFRWSMSW FIFSEVMFFG AFFTALWWTR THSLPALGSL
DNALLWPDFK AVWPSVAAGA TGSPADIVEP FQTVGPFWLP TINTALLLSS GVTLTIAHHA
LRAGHRAQTI RFMWLTVLLG VLFLGVQGYE YHHLYTELNL KLSSGAYGST FFMLTGFHGL
HVFIGMLMLL FITLRLQKGH FTPERHFGFE GAAWYWHFVD VVWLGLYMLV YWL
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