| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4382 |
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| Symbol | |
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| ID | 7974056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4627833 |
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| End bp | 4628738 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794971 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_002946259 |
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| Protein GI | 239817349 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACGC CGATTTCCGT GCAGCAGACA AGCACCGCCA ACGTGCTGCG CCAGTTCTAT
GCGCTGACCA AGCCGCGCGT GGTGCAGCTG ATCGTCTTCT GCGCCCTCAT CGGCATGGTG
CTGGCCGTGC CCGGGCTGCC CTCGTGGGCC GACGTGCAGC GCGCCGTGCT GGCCTGCATC
GGCATCTGGC TGGTGGCGGG CGCGGCGGCG GCGTTCAACT GCCTGGTCGA GAAGGGCATC
GACGCCAAGA TGAAGCGCAC CGCCTGGCGC CCCACGGCGC GCGGGCAGCT CAGCGACCTG
CAGGCGCTGG TGTTCTCGGC GCTGCTGTGC GCGGCCGGCT CGGCGCTGCT CTGGTTCCAG
GTCAACCCGC TCACCATGTG GCTGACCTTT GCCACCTTCG TCGGCTACGC GGTGATCTAC
ACCGTGATCC TCAAGCCGCT GACGCCGCAG AACATCGTGA TCGGCGGCGC CTCGGGCGCG
ATGCCGCCGG TGCTGGGCTG GGCCGCAATG ACCGGCGACG TGGGCCCCGA GGCACTGATC
CTGTTCCTGA TCATCTTCCT GTGGACGCCG CCGCATTTCT GGGCGCTGGC GCTCTACCGC
GTCGAGGACT ACCGCAAGGC CGGCCTGCCG ATGCTGCCCG TCACGCACGG CAACGAGTTC
ACGCGGCTGC AGGTGCTGCT CTATACCTTC ATCTTGTTCG CGGCCTGCCT GATGCCTTTC
ATCTACGGCA TGAGCGGCTG GCTCTACCTG GCGGTGGCGG TGGGCGTGAG CATCGGCTTC
ACGGGCTATG CCTTCGCCCT CTGGCGCAAC TACTCCGATG CGCTGGCGCG CAAGACCTTC
CGGTTCTCGC TGATCCACCT GAGCGTGCTG TTCGCGGCAC TGCTCGTCGA CCATTACCTC
CGCTGA
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| Protein sequence | MSTPISVQQT STANVLRQFY ALTKPRVVQL IVFCALIGMV LAVPGLPSWA DVQRAVLACI
GIWLVAGAAA AFNCLVEKGI DAKMKRTAWR PTARGQLSDL QALVFSALLC AAGSALLWFQ
VNPLTMWLTF ATFVGYAVIY TVILKPLTPQ NIVIGGASGA MPPVLGWAAM TGDVGPEALI
LFLIIFLWTP PHFWALALYR VEDYRKAGLP MLPVTHGNEF TRLQVLLYTF ILFAACLMPF
IYGMSGWLYL AVAVGVSIGF TGYAFALWRN YSDALARKTF RFSLIHLSVL FAALLVDHYL
R
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