| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4365 |
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| Symbol | |
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| ID | 7970556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4611387 |
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| End bp | 4612127 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794954 |
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| Product | LamB/YcsF family protein |
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| Protein accession | YP_002946242 |
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| Protein GI | 239817332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATCG ACCTGAATGC CGACCTCGGC GAAGGCGCCG GCAGCGACGA AGCGCTGCTC
GGCCTCGTGA GCTCGGCCAA CATCGCCTGC GGCTGGCATG CGGGCGACGC CAAGACCATG
CGGCAGTGCG TGCGCTGGGC CATCGCGCAC GGCGTGGCCA TCGGCGCCCA TCCGAGCTTT
CCGGACCGCG AGAACTTCGG CCGCAGCACC ATGCATCTGC CGCCCGACGA GATCGTGGCC
AACGTGCTCT ACCAGGTCGG CGCGCTGGCC GCGATCGCCA AGGCCGAGGG CGGCCAGCTC
TCGCACGTGA AGGCGCACGG CCAGCTCTAC AACCAAGCCG TGAAGGAGCC CGAACTCGCC
GACGCGCTCT GCGAAGCGGT GCGGCGCTTC GATCCCTCGC TCCGCTTCTT CGGCCTTGCG
GGCAGCGGCA TGATCGACGC CGCGCGCCGT GCCGGCCTCA CGCCGGTCGA AGAGGTTTTT
GCCGACCGCG GCTACATGCC CGACGGCAGC CTGGTGCCGC GCAGCCAGCC CGGCGCGCTG
ATCGAGGACG AGGAGCAGTC CCTCGCCCAG ACGCTCTCGC TGGTGCGCGA CCGCAAGGTG
AAGGCGATCG ACGGCAGCAT CGTGCCGGTC AATGCCCAGA CCGTGTGCCT GCATGGCGAT
GGCGCCCACG CGCTGGCCTT TGCGCGCCGC ATTCGCGAGC GCCTGCAGCA AGAGGGCATC
GCGGTTCGCG CGATGGCCTG A
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| Protein sequence | MQIDLNADLG EGAGSDEALL GLVSSANIAC GWHAGDAKTM RQCVRWAIAH GVAIGAHPSF
PDRENFGRST MHLPPDEIVA NVLYQVGALA AIAKAEGGQL SHVKAHGQLY NQAVKEPELA
DALCEAVRRF DPSLRFFGLA GSGMIDAARR AGLTPVEEVF ADRGYMPDGS LVPRSQPGAL
IEDEEQSLAQ TLSLVRDRKV KAIDGSIVPV NAQTVCLHGD GAHALAFARR IRERLQQEGI
AVRAMA
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