Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4364 |
Symbol | |
ID | 7970555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4610719 |
End bp | 4611378 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794953 |
Product | pyrrolidone-carboxylate peptidase |
Protein accession | YP_002946241 |
Protein GI | 239817331 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGC GAACCAACGT CCTTCTGACC GGCTTCGATC CGTTCGACCG CGAAGCGCTC AACCCGTCAT GGGAGGCCGT GCGCGCGCTC GACGGCTGGC AGTGCGGCCC TGCCACCGTG CATGCGCGCC AGATGCCCTG CGTGTTCGGC CAGGCCATCG AGGCGCTGGC AAGTGCGATG GACGAACTGC AGCCCCGGCT GGTGCTGTGC ATCGGCCAGG CCGGCGGCCG CGCCGAGATC ACGCCCGAGC GCGTGGCCAT CAACATCGAC GACGGCCGCA TCGCCGATAA CGCGGGCCGA CAGCCGATCG ACCTGCCCGT GGTGCCCGGC GCGCCCGCGG CGTATTTCTC GACGCTGCCC ATCAAAGCCA TGGTGCGCGA CCTGCGTGCG GCAGGCATTC CGGCGTCGGT CTCGAACACG GCCGGCACTT TCGTCTGCAA CCACATCTTC TACGGCCTGA TGCACCGCAT CGCCACGCAT CCGGTGGCCG GGCTGCGCGG CGGCTTCATC CACATTCCCT ACCTGCCCGA GCAGGCGGCG CGTTTTCCCG GCGCGCCGAG CATGTCGCTG GCCACCATGG TCGAGGCGCT GCGCATCGCG GTGGCGACCG CGCTGGCCGT TGAAAAGGAC GTGGCCGAAA CCGGCGGTCA GCTCCACTGA
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Protein sequence | MAQRTNVLLT GFDPFDREAL NPSWEAVRAL DGWQCGPATV HARQMPCVFG QAIEALASAM DELQPRLVLC IGQAGGRAEI TPERVAINID DGRIADNAGR QPIDLPVVPG APAAYFSTLP IKAMVRDLRA AGIPASVSNT AGTFVCNHIF YGLMHRIATH PVAGLRGGFI HIPYLPEQAA RFPGAPSMSL ATMVEALRIA VATALAVEKD VAETGGQLH
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