| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4299 |
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| Symbol | |
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| ID | 7970486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4542557 |
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| End bp | 4543279 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794885 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946177 |
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| Protein GI | 239817267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGC CCACCATTGA ACTCCGGTTC GACGACGTCA CCGCAGGCTA TGGCGGCCTG
CCAGTCCTCG AGCATCTCAG CTTCAGCGTA CGCGAAGGCG AGCGCCTCGG TCTGATCGGA
CGCAACGGCG CCGGCAAGAC CACGACGCTC GCGACAGCCA TGGGCCTGGC CGACCTGATG
AAGGGGCGCA TTCATTTCGG CGGCGACGAC ATCAGCAACG CGAGCACCTA CGCACGCTCG
CGCGCTGGCC TCGGCTACGT ACCGCAGAGC CGCGACATCT TCCCCTCGCT GACAGTGGAG
GAGAACCTGC TGTCGGGCTT GCAGGGACGC TCGGCCAGCG TTGCCCTGCC ACCGATCTAT
GCGCTGTTTC CGCGGCTCAA GGAGCGGCGA CGCAACGGAG GCACGCAGCT GTCGGGCGGC
GAGCAGCAAA TGCTGTCCGT GGCACGGGCA CTCGTCGGGC AGCCGCGCAT CCTGTTGCTC
GACGAACCGC TGGAAGGCCT GGCGCCGATG GTGCGCGAGG AGCTGATGGA CGCCATCGTC
CGAATGAGTG ATCAGCTCGG CGTGGGCTGC ATCATCGTGG AGCAGCACGT GGATGTCGTT
CTCGAATTTT CCAACAACGT GATCGTGCTG GAACGCGGCC TCGCTGCCTA CTCCGGGTCA
GCCGCGGTGC TGAGCGGCGA AGAGGCATTG CTGAACCGCA CCATCGGCAT CCAGAAGTGC
TGA
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| Protein sequence | MPKPTIELRF DDVTAGYGGL PVLEHLSFSV REGERLGLIG RNGAGKTTTL ATAMGLADLM
KGRIHFGGDD ISNASTYARS RAGLGYVPQS RDIFPSLTVE ENLLSGLQGR SASVALPPIY
ALFPRLKERR RNGGTQLSGG EQQMLSVARA LVGQPRILLL DEPLEGLAPM VREELMDAIV
RMSDQLGVGC IIVEQHVDVV LEFSNNVIVL ERGLAAYSGS AAVLSGEEAL LNRTIGIQKC
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