| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4298 |
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| Symbol | |
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| ID | 7970485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4541812 |
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| End bp | 4542576 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794884 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946176 |
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| Protein GI | 239817266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACC GACTCCAAAC CCACGGCCTG TGTCACTCCT TTGGCGGCCT GGCAGTCACG
CAGAACGTCA CGCTGTCCCT CCCCCCAGGA GCCCGCACTG CATTGATCGG TCCGAATGGC
GCTGGCAAGA CGACTTTGGT CAACCTGCTG AGCGGGGCGA TGCGCCCGCA GTCGGGTGAC
ATCCAGCTGG ACGGCCGCTC GATCGTCCAG CTGCCGCAGT ACGCACGCGT GCGCAACGGC
ATCGTTCGCA CGTTCCAGAT CAGCCGCCTC TTCAAGGAAC TCACCGTGGC GGACAACGTC
AGGGTCGCCG TGTTGCAGCG GCACCGGGCT TCCATGCAGT GGTGGCCCTC GCCAGTGCGT
TCCGCACGCG TGCAAAAAGA TGTCGACGAG ACACTCGGTA TGCTGGGACT GCACCCCTAT
GCGAACCGGG TGGTGGGACA ACTGGCACTG GGCGAGCAGC GGCTTGCGGA GATCGCCCTG
GCGCTCGCGA TGAGGCCGCA GGTGCTGCTC CTCGATGAGC CGGGCGCAGG CGTGCCGCAG
GGTGAGGGCG GCCGGATCAT GGAAGCCATC GGGAGCTTGC CGAAGGATCT ATCCGTCCTG
CTGATCGAGC ACGACATGGA CCTGGTGTTC CGGTTCGCGT CGCACATCAT CGTCCTGGTC
GCCGGTGCGG TGATGGTCGA GGGGACGCCG CAGGAAGTCG CTGCCAACGA GCAGGTCAAG
CAAATCTACT TCGGACGAGA CGGTCATGCC CAAGCCCACC ATTGA
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| Protein sequence | MTHRLQTHGL CHSFGGLAVT QNVTLSLPPG ARTALIGPNG AGKTTLVNLL SGAMRPQSGD
IQLDGRSIVQ LPQYARVRNG IVRTFQISRL FKELTVADNV RVAVLQRHRA SMQWWPSPVR
SARVQKDVDE TLGMLGLHPY ANRVVGQLAL GEQRLAEIAL ALAMRPQVLL LDEPGAGVPQ
GEGGRIMEAI GSLPKDLSVL LIEHDMDLVF RFASHIIVLV AGAVMVEGTP QEVAANEQVK
QIYFGRDGHA QAHH
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