Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4276 |
Symbol | |
ID | 7971360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4517679 |
End bp | 4518434 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644794863 |
Product | Asp/Glu/hydantoin racemase |
Protein accession | YP_002946155 |
Protein GI | 239817245 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.23954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC TGCTGATCAA CCCCAACACC TCGCAAAGCG TCTCGGACCT GATCGCGGCC GAGGCCCGCC GCGCGGCCGC CGGCGACACG CGCATCGAGG TGCTGACGGC GCCCTTCGGC GTTGCCTACA TCGAGACCCG GTTCGAGTCG CTGATCGGCG CCTATGCGGC CGCCACGCTG GCCGCGGAGC ACCACGCGCG GCACGATGCG ATCGTGGTCG CGGCCTTCGG CGACCCCGGC ATCGACGGCC TGCGCGAGGC GCTCGACATT CCAGTGGTCG GCCTCACCGA GGCCGCGCTG ATGAGCGCCT GCCTGCTGGG CAAGCGCTTC TCCATCATCG CGATCTCGCG CCGCATCACG GCCTGGTACC GCGAGTGCGT GCAGGCCAAC GGGCTGCTGG AGCGGCTTGC GAGCATCCGC AGCCTGGAGG GGCCGCTCAA GGACATCGGC AGCGTGCAGG ACGACCATGG CGAGCGCCTC GAGGCCCTGT GCATGTCGGC CGTCGAGGAC GACGGCGCAG ACGTGATCAT CATCGCCGGC GCGCCGCTGG CGGGCCTTGC GCGCTCGATC AAGGACCGGA TCCCGGTGCC CGTGGTGGAC GGCGTGTCCA GCGCCGTCTG CCATGCGCAG ACGCTCGCAT CGCTGGCGCC CGCGCCGGCG CGCAGGGGCA GTTTCGCTCC GCCGCCGGTC AAGCCGAACC AGGGGCTGCC CGATGCGCTG GCGCGCCTCC TGGCCCGCGA TGCCGCCCGC GCCTGA
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Protein sequence | MNLLLINPNT SQSVSDLIAA EARRAAAGDT RIEVLTAPFG VAYIETRFES LIGAYAAATL AAEHHARHDA IVVAAFGDPG IDGLREALDI PVVGLTEAAL MSACLLGKRF SIIAISRRIT AWYRECVQAN GLLERLASIR SLEGPLKDIG SVQDDHGERL EALCMSAVED DGADVIIIAG APLAGLARSI KDRIPVPVVD GVSSAVCHAQ TLASLAPAPA RRGSFAPPPV KPNQGLPDAL ARLLARDAAR A
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