| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4243 |
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| Symbol | ureC |
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| ID | 7971327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4486287 |
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| End bp | 4488005 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794830 |
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| Product | urease subunit alpha |
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| Protein accession | YP_002946122 |
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| Protein GI | 239817212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGA TTGGACGGCG TGCGTACGCC GAGATCTTCG GCCCCACCGT GGGCGACCGC
GTGCGGCTCG CCGACACCGA CCTGCTGATC GAGGTCGAGG CCGACTACAC GCTGCGCGCC
GGCGGCTACG GCGAAGAGGT GAAGTTCGGT GGCGGCAAGA CCATCCGCGA CGGCATGGCG
CAATCGCAGC GCACAAGGGC GCAAGGCGCC GTCGACACCG TGCTGACCAA CGCGCTGATC
CTCGACCACT GGGGCATCGT GAAGGCCGAC ATCGGCCTGA AGGACGGTCG CATCGCCGCC
ATCGGCAAGG CCGGCAATCC CGACGTGCAG CCGGGCGTGG ATATCGTCAT CGGACCGGGC
ACCGAGATCA TCAGCTGCGA GGGCAACATC GTCACGGCCG GCGGCATCGA CAGCCACATC
CACTTCATCT GCCCGCAGCA GATCGAGGAG GCGCTCGCCT CCGGCATCAC CACCATGCTG
GGCGGCGGCA CAGGCCCCGC CACCGGCACC TTCGCGACCA CCGCCACGCC CGGCCCCTGG
CACATCGAAC GCATGCTGCA GGCGGCCGAC GCGTTCCCGA TGAACCTGGG CTTCCTCGGC
AAGGGCAATG CGAGCCTTCC GGATGCGCTG CACGAGCAGA TCGAAGCCGG CGTCATGGGC
CTGAAGCTGC ACGAAGACTG GGGCACCACG CCTTCGGCCA TCAGCAACTG CCTGGACGTG
GCCGACGCCA CCGACACGCA GGTGGCGATC CACAGCGACA CGCTCAACGA ATCGGGCTTC
GTCGAGAACA CCATCGCGGC CGTGGGCGGC CGCTCGATCT GCGCCTTCCA CACCGAAGGC
GCGGGCGGCG GCCATGCGCC GGACATCCTG CGCGTGGTGG GCGAGGAGAA CTTCCTGCCC
TCTTCCACCA ACCCCACCAT GCCCTACACC GTGAACACGC TCGACGAGCA CGTCGACATG
CTCATGGTGT GCCACCACCT GGACGCCGGC ATTGCCGAGG ACCTGGCCTT TGCCGAGTCG
CGCATCCGCA AGGAGACCAT CGCCGCCGAG GACGTGCTGC ACGACCTGGG CGCGATCAGC
ATGTTCAGCT CCGACAGCCA GGCCATGGGC CGCGTCGGCG AAGTGGTGCT GCGCTGCTGG
CAGACCGCGC ACAAGATGAA GCTGCAGCGC GGCAAGCTGC CCGAGGACAG CGAACGCAAC
GACAACTTCC GCGTGAAGCG CTACGTGGCC AAGTACACGA TCAACCCCGC CATCTCGCAC
GGCATTGCGC ACGAGGTGGG CTCGATCGAG GTCGGCAAGT GGGCCGACCT CGTGATCTGG
AAACCCGCCT TCTTCGGCGT GAAGCCCTTC ACCCTCATCA AGGGCGGCAC CATCGCCATG
GCTGCCATGG GCGACCCCAA CGCGTCGATC CCCACGCCGC AGCCGGTGCA CTACCGCCCG
ATGTTCGGCA GCTACGGCGG CTCGCTGGCC AGGAGCTCGC TGACCTTCGT CTCGCAGGCC
GGACTGGCCG CGGGCATCAA GGAACGCTAC GGCCTGGCAA AGCACCTCAG CGCGGTGAAG
AACATCCGCA ATGTGCGCAA GAAGGACCTG GTCCACAACG GCTACACGCC GAAGATGGAG
ATCGATGCGC AGACCTATGC GGTGCGCGCC GACGGGCATC TGCTGACCTG CGATCCGGCG
GTGCAGCTGC CGCTGACGCA GCGGTATTTT CTGTTCTGA
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| Protein sequence | MATIGRRAYA EIFGPTVGDR VRLADTDLLI EVEADYTLRA GGYGEEVKFG GGKTIRDGMA
QSQRTRAQGA VDTVLTNALI LDHWGIVKAD IGLKDGRIAA IGKAGNPDVQ PGVDIVIGPG
TEIISCEGNI VTAGGIDSHI HFICPQQIEE ALASGITTML GGGTGPATGT FATTATPGPW
HIERMLQAAD AFPMNLGFLG KGNASLPDAL HEQIEAGVMG LKLHEDWGTT PSAISNCLDV
ADATDTQVAI HSDTLNESGF VENTIAAVGG RSICAFHTEG AGGGHAPDIL RVVGEENFLP
SSTNPTMPYT VNTLDEHVDM LMVCHHLDAG IAEDLAFAES RIRKETIAAE DVLHDLGAIS
MFSSDSQAMG RVGEVVLRCW QTAHKMKLQR GKLPEDSERN DNFRVKRYVA KYTINPAISH
GIAHEVGSIE VGKWADLVIW KPAFFGVKPF TLIKGGTIAM AAMGDPNASI PTPQPVHYRP
MFGSYGGSLA RSSLTFVSQA GLAAGIKERY GLAKHLSAVK NIRNVRKKDL VHNGYTPKME
IDAQTYAVRA DGHLLTCDPA VQLPLTQRYF LF
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