| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4186 |
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| Symbol | |
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| ID | 7971923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4429525 |
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| End bp | 4431258 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794772 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_002946065 |
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| Protein GI | 239817155 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.494266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCTGA GCAATATTTC CATCGGCAAG CGGCTGGCCG TCGTGATCGG CGTCATCCTC
GCCCTGTCTC TCACGAGCAG CGTGCTTGCC GTGCTGAAGC TGCAGCAGCT CGGCGAGGAA
ATCAATGCGA TGGTCGAGAA GAACATCAAG ACCGAGCGCG CGGGCTCCGA CTGGCTGCGC
AACACCAACT CGGGCGTCCA GCGCGCCGCG GCCATTGCCA AGAGCAGCGA TGCGAGCCTG
ATCGCCTACT TCGCGCCGGC CACGGCGCTC TCCATCAAGG AGACCAACGA GCTGCAGAAG
TTCATCGAGG AACAGATGGA CACGCCCGAA AAGAAGGCGC TGTACGACAA GGTCGGCGAG
CTGCGCAAGG CCTACCTCGC GGCCCGCGAG GAGGTCAGCA AGGCCAAGCT GGCGGGCGAC
ATGGAAGGCG CCAACCGGAT CTTCAACGAG CGCTTCGAGC CCACCTCGCG CAGCTATCTT
GCAGGCGTGC AGCAGATGGT GGACACGGAG CGCGCGCTGC TCGACGCCGC GGCCGAGCGC
AGCAAAGAGA TGCGCGCCAG CACCAGCCTG ATGCTCGTCG TCTTCGGCGT GCTGTCGCTG
GGCCTGGGCC TGGTGCTCGC CTGGCTGCTG GTGCGCAGCA TCACGCATCC GCTGCGCCGT
GCTGTCGAAG TGGCCGAGGC GGTGGCCGCC GGCGACCTGA CCAGCCGCAT CGAAGTGACG
ACGAAGGACG AGACCGGCCA GTTGATGCAC GCGCTCAAGG GCATGAACGG CAGCCTGGCC
AAGGTGGTGG GCGAAGTGCG CCACGGCACC GATGCGATCG CGACGGCTTC GGGACAGATT
GCGGCGGGCA ACCAGGACCT GTCTTCGCGC ACCGAGGAGC AGGCCAGCTC GCTCGAGCAG
ACGGCGGCCT CGATGGAAGA ACTCACGAGC ACCGTCAAGC AGAACGCCGA CAACGCACGC
CAGGCCAACC AGCTGGCGGT CTCCGCCTCT GAAGTGGCGG TGCGCGGCGG CGGCGTGGTC
AGCCAGGTGG TGGACACCAT GGGTTCCATC AACAGCTCGT CCAAGAAGAT CGTCGACATC
ATCGGCGTGA TCGATGGCAT CGCGTTCCAG ACCAACATCC TGGCTTTGAA CGCAGCCGTC
GAGGCGGCAA GGGCTGGTGA ACAAGGCCGC GGCTTCGCGG TCGTCGCTTC CGAAGTGCGC
AACCTCGCCC AGCGCTCGGG CGCAGCCGCC AAGGAAATCA AGGGCCTGAT CGACGACTCG
GTCGACAAGG TCGAGGCCGG CAGCCGCCAG GTGGCCGAAG CGGGCCGCAC GATGGACGAG
ATCGTCGACA GCGTGAAACG CGTGACCGAC ATCATGGGCG AGATCACGGC CGCGAGCCAG
GAGCAGAGCA CCGGCATCGA GCAGGTGAAC CAGGCCATTG CACAGATGGA CCAGGTCACG
CAGCAGAACG CGGCGCTGGT GGAAGAAGCC GCGGCCGCGG CGCAATCGAT GCAGGAGCAG
GCTGCGAGCC TGGTCGAGTC GGTCAGCGTG TTCAAGCTGG ACAGCGACAA CGCACCGCGC
CCGCTCGTGC AGATGCAGGC CCGGGTGCAG CCGGCGCTGC CGCCGCGCAA AGCGGTGCCC
GCGCTGAAGG CGCCCGCCCG GCCGGCGGCG GCCCGCCGCG CAGCCGGCAC CCGTTCCGCT
CCAAGGCTCG CCGCGGCCCA GGCCGCCGCG CCGGGCGACT GGACCGAGTT CTAA
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| Protein sequence | MFLSNISIGK RLAVVIGVIL ALSLTSSVLA VLKLQQLGEE INAMVEKNIK TERAGSDWLR
NTNSGVQRAA AIAKSSDASL IAYFAPATAL SIKETNELQK FIEEQMDTPE KKALYDKVGE
LRKAYLAARE EVSKAKLAGD MEGANRIFNE RFEPTSRSYL AGVQQMVDTE RALLDAAAER
SKEMRASTSL MLVVFGVLSL GLGLVLAWLL VRSITHPLRR AVEVAEAVAA GDLTSRIEVT
TKDETGQLMH ALKGMNGSLA KVVGEVRHGT DAIATASGQI AAGNQDLSSR TEEQASSLEQ
TAASMEELTS TVKQNADNAR QANQLAVSAS EVAVRGGGVV SQVVDTMGSI NSSSKKIVDI
IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVASEVR NLAQRSGAAA KEIKGLIDDS
VDKVEAGSRQ VAEAGRTMDE IVDSVKRVTD IMGEITAASQ EQSTGIEQVN QAIAQMDQVT
QQNAALVEEA AAAAQSMQEQ AASLVESVSV FKLDSDNAPR PLVQMQARVQ PALPPRKAVP
ALKAPARPAA ARRAAGTRSA PRLAAAQAAA PGDWTEF
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