Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4181 |
Symbol | flgL |
ID | 7971918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4420790 |
End bp | 4422001 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794767 |
Product | flagellar hook-associated protein FlgL |
Protein accession | YP_002946060 |
Protein GI | 239817150 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCA GCACCCAATC CTTCTACGCC CAGAGCATGA GCTCGCTCGG TTCGCAGCAG CAGCAGCTGT TCCGCATCCA GCAGCAGCTC GCTGCGGGCA CCAAGTTCCT GACGGCTGCC GACGATCCGG TGGCCGCCGC GCGCGCGCTG GGCGTGAGCC AGTCGATGGC GGAGTCGGCG CAGTACGCCA CCAGCCGCAG CCGCGCGATG CTCTCGCTCT CGCAGGAAGA GACCGCGCTG AAGTCGGCCA CCTCGATCAT GCAGAACATG AAGACGCTCG CGGTGCAGGC GGGCAACGGC ACGCTGTCGG ATGCGGACCG CGCCTCGCTG GCCACCACGC TGCAGGGCAA CCTGGACCAG CTCGTGAACG TGGCCAACGC GGACGACGGC AACGGCCAGT TCCTGTTCGC CGGCTTCAAG AGCGGGAGCC AGCCCTTCGT GGCCGGCGCC GCCGGCGGCA TCCAGTACAT GGGCGACCAG GGCCAGCGGC TGATGCAGGT CGACGTGTCG CGCCAGATGT CCACCACGGA CGACGGGCGC AGCGTGTTCC AGTCGGTGCA GGGCGGCGCG GGCTACGTGA GCTCGGCGGG CGCGGCCAAC ACCGGCTCCG GCGTCTTCGG CGCCGTGGGC GTGACCGACG CGGGCGCGGC CAACTACGGC AAGGACTTCG TCATCAGCTT CAGCGGCGGC AACTACACGG TGGCTACGCA GGAGACGCCG CCCGTGGTCG CCGCATCGGG CGCCTACGTG CCGGGCGCCG CCATCTCGTT CGGCGGCCTG CAGATCACCA TGAGCGGCGC GCCGGCCGAT GGCGACACCT TCCAGGTGGC CACCGCGCGC AATGCGGGCA CCGACGTGTT CGCCGCCATC GGCGAACTGG TCACCGCGCT CAGGCAGCCG CTCGCCGGCA ATGGCGATTC GGCGAAGGCC GACCTGCTCA ACGCGCTCAG CACCTTCAAC GTCAAGATCA CCCATGCGCA CGACAACGTG CTCACCGTGA TGTCGTCGAT CGGCTCGCGC ATGAACGAGA TCGACGCGCT CGACACCAGC GGTGCCTCGC GCGGCCTGAC CGACAAGGCC TACCTCTCGG AGCTGGTGGA CCTGGACCCG GCCAGCGCCA TCTCGGAATT CCTGCAGCGC CAGACCTCGC TCCAGGCCAC CCAGCAGACC TTCGCGCGGC TGCACAGCAT CGCGCTGTTC AACTACCTGT GA
|
Protein sequence | MRISTQSFYA QSMSSLGSQQ QQLFRIQQQL AAGTKFLTAA DDPVAAARAL GVSQSMAESA QYATSRSRAM LSLSQEETAL KSATSIMQNM KTLAVQAGNG TLSDADRASL ATTLQGNLDQ LVNVANADDG NGQFLFAGFK SGSQPFVAGA AGGIQYMGDQ GQRLMQVDVS RQMSTTDDGR SVFQSVQGGA GYVSSAGAAN TGSGVFGAVG VTDAGAANYG KDFVISFSGG NYTVATQETP PVVAASGAYV PGAAISFGGL QITMSGAPAD GDTFQVATAR NAGTDVFAAI GELVTALRQP LAGNGDSAKA DLLNALSTFN VKITHAHDNV LTVMSSIGSR MNEIDALDTS GASRGLTDKA YLSELVDLDP ASAISEFLQR QTSLQATQQT FARLHSIALF NYL
|
| |