| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4109 |
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| Symbol | |
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| ID | 7974431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4351726 |
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| End bp | 4353045 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794695 |
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| Product | histidine kinase |
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| Protein accession | YP_002945988 |
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| Protein GI | 239817078 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTGA GCCTGCTGCT CGCGGCGCTG GCCGCGCTGG CCCTCGTTGG GATCAACGAG
GCCGGCTACC GCCAGTCGAG CCGCGCCCTG GCAGACATCG ACGCGGCGCT GAAGGTGCGC
GGTACGCTCA ACCAGATCCT GCAGAACATG CTCGATGCCG AAACCGGCCA GCGAGGCTAC
CTCCTCACCG GCGAAGCCAG CTACCGGCAA CCCTACGACA CGGCGGTCAA GCAGGTCGAC
GGCCACCTTG CGGCGCTACG CCAACTGTAC GCCGAACGCC CGGCCGAGCG TACGCGGCTG
GCAGAGCTTT CGAAGCATGT GCTGCGCAAG ATCGCTGAAA TGGACATGAG CGTGCGGCTG
CGGCAGGACG GCAAGGACGA GGCCTGGAAA TTCGTCATCA CGACGGACGT GGGGCGCGAG
GAAATGGATT CCATTCGCAA GGCCGCCGGC GAATTGGCGG AGATCAGCAA CCAGACCCTG
CACCAGAGCC AGATCCAGGT GATGAAGTCG CTGCGGCTTG CGCGCATCGG CACCGCCATC
GTCGCGCTTG CCGCGTTCCT TGCCTTCTTC CTGTACCTGC GGCAGGCGCA CGCGCTGCGC
TCCATCGGAG AGCGCCAGCA GGAAACACTG CAGCGCGAGC GCAATGCGCT CGAAGACGAA
GTGCGCGAAC GCACCGCATC GCTGGCCGAA CTGGCCACGC ACCTGCAGGA CGTGCGCGAA
ACCGAGCGCG GCTATCTCGC GCGGGAGCTG CACGACGAGC TCGGCTCGCT GCTGACCGCC
GCCAAGCTGG ACGTCGCACG CCTCAAGTCG CGGCTGCTGG AGGCGCCCGA CGCCACCCAG
CGGCTGCAGC ACCTGACCGA GCTGCTCAAC AGCGGCATCG CGCTCAAGCG CCGCATCATC
GAGGACCTGC GGCCGTCGTC GCTGTCGAAC CTCGGGCTGG TCGCGTCGCT CGAGATCCTC
GGGCGCGAGT TCGCCGAACG CTCGGGCATC CAGGTCCAGA TGGTGCTCGA ACCGGTGGCC
ATGGACGAAT CGCGCCAGCT CACGATCTAC CGCATGGTGC AGGAGAGCCT GACCAACATC
GGCAAGTACG CCGAGGCCAG CGAAGCGACG ATCGTGCTGA AGAACTACGA GAACCACGCG
GTCGTGGAAG TGGCCGACAA CGGCAAGGGC TTCGATCCCC AGCGCATCCG TCCGTCGACG
CACGGCCTGG CCGGCATGCG CCACCGGGTC GAGGCGGCCA GGGGCAGGCT CACGATCTCG
TCGACGCCGG GCCGCGGCAC CCGCGTGAGC GCCATGCTGC CGATCGCGAA GACGCTCTGA
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| Protein sequence | MAVSLLLAAL AALALVGINE AGYRQSSRAL ADIDAALKVR GTLNQILQNM LDAETGQRGY
LLTGEASYRQ PYDTAVKQVD GHLAALRQLY AERPAERTRL AELSKHVLRK IAEMDMSVRL
RQDGKDEAWK FVITTDVGRE EMDSIRKAAG ELAEISNQTL HQSQIQVMKS LRLARIGTAI
VALAAFLAFF LYLRQAHALR SIGERQQETL QRERNALEDE VRERTASLAE LATHLQDVRE
TERGYLAREL HDELGSLLTA AKLDVARLKS RLLEAPDATQ RLQHLTELLN SGIALKRRII
EDLRPSSLSN LGLVASLEIL GREFAERSGI QVQMVLEPVA MDESRQLTIY RMVQESLTNI
GKYAEASEAT IVLKNYENHA VVEVADNGKG FDPQRIRPST HGLAGMRHRV EAARGRLTIS
STPGRGTRVS AMLPIAKTL
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