| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4081 |
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| Symbol | metG |
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| ID | 7974403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4325470 |
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| End bp | 4327584 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794667 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_002945960 |
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| Protein GI | 239817050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.613887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC CGCGCAAGCT CTTCGTCACC ACCGCCCTGC CGTATGCCAA CGGCAAGTTC
CATATCGGCC ACATGATGGA ATACATCCAG GCCGACATCT GGGTGCGGAA CCAGCGAATG
AATGGCGCCG AGGTCAACTT CGTCTGCGCC GACGACGCGC ACGGCGCGGC CATCACCATC
GCGGCCGACA AGGCCGGCGT GACGCCGCAG GCCTTCGTGG CCGAGATCGC CGCGGGCCGC
AAGCCCTACC TGGACGGCTA CTACATCTCG TTCGACAACT GGCACTCGAC CGACGCGCCC
GAGAACCACC AGCTCGCGCA GGACATCTAC CGCGACCTGC GCGCCAACGG CCTGATCGAA
ACCAAGAGCG TCGAGCAGTT CTACGACCCC GAAAAGGGCA TGTTCCTGGC CGACCGCTTC
ATCAAGGGCG AGTGCCCCAA CTGCCACGCC AAGGACCAGT ACGGCGACAA CTGCGAGGTG
TGCGGCGCGG TCTACGCGCC CACCGAGCTG ATCAATCCCT ACTCGGCCCT GTCCGGCGCC
AAGCCCGAGC TGCGCAGCTC CGACCACTTC TTCTTCAAGC TCTCGGACCC GCGCTGCGAG
GCCTACCTGA AGGAATGGAC CGCCGCTGCC GGCCACGTGC AGTCCGAAGT GCAGAACAAG
ATCCGCGAGT GGCTCTACAA GGACGACGAA GGCAAGGGCG GCCTCGGCGA CTGGGACATC
AGCCGCGATG CGCCCTACTT CGGCATCGAG ATTCCCGATG CGCCGGGCAA GTACTTCTAC
GTGTGGCTCG ATGCGCCCGT GGGCTATCTG GCCTCGCTGA AGAACCTGCT CGACAAGCGC
TGCATCGAGC TGGGCGGCGA CGGCATCTCG TACACCGAGT ACATGGCCGA CCCCGACCTG
GAGCAGGTGC ACTTCATCGG CAAGGACATC ATCACCTTCC ACACGCTCTT CTGGCCCGCG
ATGCTGCACT TCAGCGGCCG CAAGGCGCCC GACGCGGTGT ACGTGCACGG CCACCTGACG
GTCAGCGGCG AGAAGATGAG CAAGAGCCGC GGCACCGGCA TCGACCCGCT GCGGTACCTG
TCGATCGGCC TGGACCCCGA ATGGCTGCGC TACTACATCG CGGCCAAGCT CAACGGCCGC
AACGAGGACA TCGACTTCAA CCCTGAAGAC TTCGTCGCGC GCGTCAACAG CGACCTCGTG
GGCAAGTACA TCAACATCGC GAGCCGCGCG GCGGGCTTCA TCGGCAAGCG CTTCGGCGGC
AAGCTGGGCG AGGTGTCAGC CGACGGCGAC GCACTGCTGT TCGCGCTGCG CGATGCGGCG
CCGCAGCTGC ATTCGCTCTA CGACGGCCGC GACTACGCCC GCGCGCTGCG CGAGGTGATG
GCGCTGGCCG ACAAGGTGAA CGAGTACGTC GACCAGAACA AGCCCTGGGA ACTGGCCAAG
AAGGAAGGCC AGGAAGCGCG GCTGCACGAC GTGTGCACCG TGTGCATCGA GGCCTTCCGC
CTGCTCACGC TGTACCTGAA GCCGGTGCTG CCGGCGCTCG CCGCCAATGT CGAAGCCTTC
CTCCGGATCG AGCCGCTCGC GTGGGCCGAT GCCGCGCAGA GCCTGCCGGC CGGCCACGCC
ATCGGCGAAT ACAAGCACCT GATGCAGCGC GCCGACGCCA AGATGGTCGA CAAGCTGTTC
GACGCGCCCG AGCCCGCACC ACCGGCCGCC GCCGCGGCAG AAGAATCGCT GCCGGGCGGC
GAAGCCATCG CGCCCGCCAT CACCATCGAC GACTTCGCCA AGATCGACCT GCGCATCGCA
AAGATCGTGG CCTGCGAGAA GGTCGAGGGC TCGACCAAGC TGCTGCGCCT GACGCTCGAC
GCGGGCGAGG GCACCGACCC GCAGGGGAGT CCTGTTCTGC GCAACGTGTT CAGCGGCATC
GCCTCCGCTT ACCAGCCCGA GCAGCTCGTG GGCAAGCTCA CGGTGCTGGT CGCCAACCTC
GCGCCGCGCA AGATGAAGTT CGGCATCAGC GAAGGCATGG TGCTGGCCGC AAGCCATGGC
GACGAAAAAG CCCACCCCGG CATCCACGTG CTCGAGCCCT GGCCGGGCGC GACGCCGGGC
ATGCGCGTTC GCTGA
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| Protein sequence | MSAPRKLFVT TALPYANGKF HIGHMMEYIQ ADIWVRNQRM NGAEVNFVCA DDAHGAAITI
AADKAGVTPQ AFVAEIAAGR KPYLDGYYIS FDNWHSTDAP ENHQLAQDIY RDLRANGLIE
TKSVEQFYDP EKGMFLADRF IKGECPNCHA KDQYGDNCEV CGAVYAPTEL INPYSALSGA
KPELRSSDHF FFKLSDPRCE AYLKEWTAAA GHVQSEVQNK IREWLYKDDE GKGGLGDWDI
SRDAPYFGIE IPDAPGKYFY VWLDAPVGYL ASLKNLLDKR CIELGGDGIS YTEYMADPDL
EQVHFIGKDI ITFHTLFWPA MLHFSGRKAP DAVYVHGHLT VSGEKMSKSR GTGIDPLRYL
SIGLDPEWLR YYIAAKLNGR NEDIDFNPED FVARVNSDLV GKYINIASRA AGFIGKRFGG
KLGEVSADGD ALLFALRDAA PQLHSLYDGR DYARALREVM ALADKVNEYV DQNKPWELAK
KEGQEARLHD VCTVCIEAFR LLTLYLKPVL PALAANVEAF LRIEPLAWAD AAQSLPAGHA
IGEYKHLMQR ADAKMVDKLF DAPEPAPPAA AAAEESLPGG EAIAPAITID DFAKIDLRIA
KIVACEKVEG STKLLRLTLD AGEGTDPQGS PVLRNVFSGI ASAYQPEQLV GKLTVLVANL
APRKMKFGIS EGMVLAASHG DEKAHPGIHV LEPWPGATPG MRVR
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