| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4055 |
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| Symbol | |
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| ID | 7974377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4296163 |
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| End bp | 4297647 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794642 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945935 |
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| Protein GI | 239817025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1106] Predicted ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.945685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGG CGTCATTCCA GATCACCAAC TTTCGCTCGA TCAACGACAG CGGCTCCATC
GACACCTCGC AGATCACCGC GATCCTCGGC CGCAATGACA GCGGCAAATC GAACCTGCTG
CGCGCACTGC ACAGCCTGAA CCCCGCCGAA GGCCTGGCCG AACTCAGCCC GATCAAGGAC
TTTCCGCGGC ACCGCCGCCT CGAGGAGTGC CAGGGCGATA CGCCGGTCGT CGCGACGCGC
TGGGCGCTCG AAGACAGCGA GCGGGCCGAA CTGGTGCAGA TGCTCCCGCG CGCGGCCAAG
GTGCGCCACG TCACCGCGGG CCGGGGCTAC GGCACGGCGC GCTGGAGCGG CCTCGAAGGG
CTCGGCGACC TCTCGCTCGA CGTGTCCGAC ATCAAGGCCA AGGTCCGCAA GATCGTGCCC
GCCGTCAAGG CCGCGGCCGA GAAGCTCGCC GACGACGCAC GCGCGATGCT GGAGCAGGCG
GCCGACGCCT TCGACGCCGC GATGATCCTG AGCCCCGACT ACATCCGCTG GTCGGCCGGT
GCGGTGGCGG TGCTGCAGTC GCTGCGCAAG GCCATGGCCG CGGCGGATGC CGAGCTCAGC
GACAAGCAGG AGCAGATGCT GGCCGAGCTC GAGGAGATGG CCCGCGCGAT TGCCAACGAC
ACGCCGGCGC TTGCAAGGGC GAAGCAGTGG GTGCTCGACA AGCTGCCGAG GTTCGTCTAC
GTGGACGAGT ACCCGGCGCT GCCCGGCCGC CAGAACATTG CCGAGCACCT CGCGCGCAAG
GGCTGGGGGC AGGACGCGCC CGGGCAGCGC AACTTCGAGA AGCTCTGCAA GGCCGCCGGG
CTCGATCCGC AGCAGCTGCA GGAGCTGCTG GAGAAGAACG ACCAGGCCAC GCGCAACCAG
CTCGCCAACC GCGCCGGCTC CGTCGTCACC GCCGAGATCC GCCGGCTCTG GAAGGACCGC
GAGCTCAAGG TGCGCTTCAA CCTGGACGGG CCGTACATGG ACACGCTGGT GTCCGACCCG
AACCGTGCCT ACGACGTGGA AGTGAACCTC GACGAGCGCA GCCGCGGCTT CCAGTGGTTC
TTCTCGTTCT ACGTCACCTT CTTTGCGGAC ACCAAGGGCG CGGGCGATGC GATCCTGCTG
CTGGACGAGC CCGGCCTGCA TCTGCATGCG CGCTCGCAGG CCGACCTGCT CGCGCACTTC
GAGCAGGACT TCGCCAACCA GATCGTCTAC ACCACGCACT CGCCGTTCAT GGTGCCCGTG
CACCGGCCGG GCGCCGTGCG CACGGCCAGC ATGAGCGAAG CCGCCGGCAC CACCGCGAGC
AACAAGGCCG AGGGCGACGC GCGCACGCTC TATCCGCTGC AGGTGGCGCT CGCGCTGAGC
CGGATGGCGG GCGAGGGCGC GAAGCCGCAG CAAAGGGAGG GCGCGGCGCG TGTCGAGGCG
CCGTCGCGCG AGGTCAGCGA GCCGGTGGAT CTTCCTGTCC AATAG
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| Protein sequence | MRLASFQITN FRSINDSGSI DTSQITAILG RNDSGKSNLL RALHSLNPAE GLAELSPIKD
FPRHRRLEEC QGDTPVVATR WALEDSERAE LVQMLPRAAK VRHVTAGRGY GTARWSGLEG
LGDLSLDVSD IKAKVRKIVP AVKAAAEKLA DDARAMLEQA ADAFDAAMIL SPDYIRWSAG
AVAVLQSLRK AMAAADAELS DKQEQMLAEL EEMARAIAND TPALARAKQW VLDKLPRFVY
VDEYPALPGR QNIAEHLARK GWGQDAPGQR NFEKLCKAAG LDPQQLQELL EKNDQATRNQ
LANRAGSVVT AEIRRLWKDR ELKVRFNLDG PYMDTLVSDP NRAYDVEVNL DERSRGFQWF
FSFYVTFFAD TKGAGDAILL LDEPGLHLHA RSQADLLAHF EQDFANQIVY TTHSPFMVPV
HRPGAVRTAS MSEAAGTTAS NKAEGDARTL YPLQVALALS RMAGEGAKPQ QREGAARVEA
PSREVSEPVD LPVQ
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