Gene Vapar_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4037 
Symbol 
ID7974603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4280044 
End bp4281240 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID644794624 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_002945917 
Protein GI239817007 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCA AACCGCGCGT GCGTGGCTTC ATCTGCGTCA CGACCCATCC TGCGGGCTGC 
GAGGCCAACG TCAGGCAGCA GATCGGCTAT GTCAAGGCGA AGGGGCCGAT TGCGGACGGG
CCGAAGCGGG TGCTGGTCAT CGGCGCATCG ACCGGCTACG GCCTGGCCGC GCGCATCACC
GCGGCCTTCG GCTGCGGCGC CGGCACGCTG GGCGTCTTCT TCGAGCGGCC CGGCAGCGAG
AGCAAGCCCG GCTCGCCCGG CTGGTACAAC ACGGCCGCCT TCCACCGCGC CGCCGCGCAA
GAGGGCCTCT ACGCCAAGAG CATCAACGGC GACGGTTTTT CCGACGACGT GAAGCAGAAA
ACCATCGACG CGATCCGCGA GGACCTGGGC CAGGTCGACC TCGTCGTCTA CAGCCTGGCC
GCGCCGCGGC GCATCCATCC GAAGACCGGC GAGGTCTTCA ACTCGACGCT CAAGCCCATC
GGCAAGGCCG TGAGCCTGCG CGGCCTCGAC ACCGACAACG AGGTCGTCAA GGACACCGTG
CTCGAGCCCG CCACGCAGAA AGAGATCGAC GACACCGTGG CCGTGATGGG CGGTGAGGAC
TGGCAGATGT GGATCGACGC GCTGCAGGCC GCCGGCGTGC TGGCCGATGG CGCGAAGACC
ACCGCCTTCA CCTACCTGGG CGAGCGGATC ACCCACGACA TCTACTGGAA CGGCTCCATC
GGCGCCGCCA AGAAGGACCT CGACCAGAAG GTGCTCGGCA TCCGCGCCGG GCTGGCTGCC
AAGGGCGGCG ATGCGCGGGT CTCGGTGCTG AAGGCGGTCG TCACACAGGC GAGCTCGGCG
ATTCCGGTGA TGCCGCTGTA CCTGTCGCTG CTGTTCAAGG TGATGAAGGC CGAGGGCACG
CACGAGGGCT GCATCGAGCA GGTCCATGGG CTTTTTGCCG ACAGCCTCTG CGGCAGCGCG
CCGCACCTCG ACGAGGAGGG CCGGCTGCGC GCGGACTACA AGGAACTGTC CCCGCAAGTG
CAGGCGCGCG TGACGGCGCT CTGGCCGCAG GTCACGAGCC AGAACGTCCG TGAACTCACC
GATCTCGCCG GCTACAAGGC CGAGTTCCTG CGCCTTTTCG GCTTCGGCAT CGAAGGCGTG
GACTACGAGG CCGACGTGAA TCCCGACGTG GGAATTCCGA ACCTCGTCCA GGCCTGA
 
Protein sequence
MIIKPRVRGF ICVTTHPAGC EANVRQQIGY VKAKGPIADG PKRVLVIGAS TGYGLAARIT 
AAFGCGAGTL GVFFERPGSE SKPGSPGWYN TAAFHRAAAQ EGLYAKSING DGFSDDVKQK
TIDAIREDLG QVDLVVYSLA APRRIHPKTG EVFNSTLKPI GKAVSLRGLD TDNEVVKDTV
LEPATQKEID DTVAVMGGED WQMWIDALQA AGVLADGAKT TAFTYLGERI THDIYWNGSI
GAAKKDLDQK VLGIRAGLAA KGGDARVSVL KAVVTQASSA IPVMPLYLSL LFKVMKAEGT
HEGCIEQVHG LFADSLCGSA PHLDEEGRLR ADYKELSPQV QARVTALWPQ VTSQNVRELT
DLAGYKAEFL RLFGFGIEGV DYEADVNPDV GIPNLVQA