| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4018 |
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| Symbol | |
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| ID | 7974583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4262061 |
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| End bp | 4263128 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794604 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945898 |
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| Protein GI | 239816988 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCC GTTCCACCGC TTCCCTGTTC GCCCGCGCGT ATGAGCGCAA CCTGAAGGCC
CTCACGAAGA TCACGCTCGG CAACAGCAAG CGCGTGGCGG GCCAGGTGCA GCGCGCAACC
GCCAAGCGGC TCAAGCCGCC GCCGGGCAAG GGCGACTGGC TCGGCGGCAT GGCGCTGGGG
CCCGGCGGTG CGCGCGGCTA CCACCTGTTC CGCCCGGCCG GCCTGCAACT GCAGCCCGGC
GAGAAGTTGC CGCTCATGGT CATGCTGCAC GGCTGCGGCC AGACCGGGCG CGACTTCGCG
GCCAGCACGC GAATGAACGC GCTTGCGGTG CGCCAGCGCT TCCTGGTGCT CTACCTGGAG
CAGGACAGGC TGGCCCATCC CCAAGGCTGC TGGAACTGGT ACGAGCGGCG ATCGGGCAAG
GCCGACGCCG AGGCCGCCAC CTTGATGGCG GCCATCGACC AGGCCTCGAT GCTCTATCCG
GTGGACCGCG AGCGCATCGC GTTGGCGGGC CTGTCGGCCG GGGCCAGCAT GGCGGCGCTG
CTGGCCACGC GCTATCCGGC GCGCTTTCGC GCCGTGGCCA TGCATTCGGG CGTGGCGCCG
GGCGCAGCGA AGTCCTCGGC CACGGCCCTG GGCGCGATGC GCGGGCAGCA CGCGCCGCCG
ATGCCGACCA CCGCGGTCGG CAAGGCCATG GGCGCGGCCG CCGTGTTCGC GACCCTGCCG
CCGATGCTGG TGATCCATGG CGAGGCCGAT GCCGTGGTGG CGCCGAGCAA TGCCGTCAAC
AGCGCGGCCG TGTGGGCCAC GGCCGTGGGC GCCAAGCCGG GGGCCGCACG CACGCTGCAG
CGCGGCAAGC GGCACGCCAT GCGGCTGACC GAGTTCCGGC GCAAGGGCCG CACGCTGGTC
GTGCTGTGCG AGATCGCGGG ACTCGGCCAT GCCTGGAGCG GCGGTGCCGC CCAGCTGCTC
TTCAGCGACC CGGCCGGGCC CGATGCCACG CGCATGGTGT GGGCCTTTGC GGCGGCGCAG
TTCAAGCACG CGGCCAAGAT CAAGGCGGGC CTTCCGGCGG GCGCCTAG
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| Protein sequence | MARRSTASLF ARAYERNLKA LTKITLGNSK RVAGQVQRAT AKRLKPPPGK GDWLGGMALG
PGGARGYHLF RPAGLQLQPG EKLPLMVMLH GCGQTGRDFA ASTRMNALAV RQRFLVLYLE
QDRLAHPQGC WNWYERRSGK ADAEAATLMA AIDQASMLYP VDRERIALAG LSAGASMAAL
LATRYPARFR AVAMHSGVAP GAAKSSATAL GAMRGQHAPP MPTTAVGKAM GAAAVFATLP
PMLVIHGEAD AVVAPSNAVN SAAVWATAVG AKPGAARTLQ RGKRHAMRLT EFRRKGRTLV
VLCEIAGLGH AWSGGAAQLL FSDPAGPDAT RMVWAFAAAQ FKHAAKIKAG LPAGA
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